TABLE 1.
16S rRNA gene primers used for PCR and sequencing
Primer | Sequence (5′→3′) | E. coli positiona |
---|---|---|
516F | TGCCAGCAGCCGCGGTAA | 516–533 |
806F | ATTAGATACCCTGGTAGTCC | 787–806 |
806R | GGACTACCAGGGTATCTAAT | 806–787 |
911R | GCCCCCGTCAATTCMTTTGA | 930–911 |
1175F | GAGGAAGGTGGGGATGACGT | 1175–1194 |
1175R | ACGTCATCCCCACCTTCCTC | 1194–1175 |
13R | AGGCCCGGGAACGTATTCAC | 1390–1371 |
E. coli position numbers are based on reference 5.