Table 1.
Genome characteristics and assembly of Aspergillus section Fumigati strains.
| Strains | Genome size [Mb] | # of scaffolds | Average [kb] | N50 [kb] | # of Predicted proteins | # of Species-unique genes | BUSCO (4.0.6) eurotiales_odb10_genomea | BUSCO (4.0.6) eurotiales_odb10_proteina | References |
|---|---|---|---|---|---|---|---|---|---|
| A. fumigatus Af293 | 29.42 | 9 | 3268.9 | 3948.4 | 9,841 | 1,507 | C:99.7%[S:99.4%,D:0.3%],F:0.0%,M:0.3% | C:98.5%[S:98.2%,D:0.3%],F:0.7%,M:0.8% | Nierman et al., 2005 |
| N. fischeri NRRL 181T | 32.55 | 976 | 33.3 | 2929.1 | 10,406 | 1,245 | C:99.7%[S:99.2%,D:0.5%],F:0.0%,M:0.3% | C:98.3%[S:98.0%,D:0.3%],F:1.3%,M:0.4% | Fedorova et al., 2008 |
| A. lentulus IFM 54703T | 30.77 | 12 | 2564.5 | 4166.7 | 10,319 | 948 | C:99.7%[S:99.5%,D:0.2%],F:0.0%,M:0.3% | C:98.8%[S:98.7%,D:0.1%],F:0.6%,M:0.6% | Kusuya et al., 2016 |
| A. udagawae IFM 46973T | 32.25 | 17 | 1897.1 | 4123.3 | 10,796 | 1,420 | C:99.7%[S:99.5%,D:0.2%],F:0.0%,M:0.3% | C:99.1%[S:98.9%,D:0.2%],F:0.2%,M:0.7% | Kusuya et al., 2015 |
| A. viridinutans IFM 47045T | 34.88 | 47 | 742.3 | 2861.4 | 10,039 | 1,259 | C:99.7%[S:99.5%,D:0.2%],F:0.0%,M:0.3% | C:99.2%[S:99.0%,D:0.2%],F:0.2%,M:0.6% | This study |
| A. pseudviridinutans IFM 55266 | 33.33 | 24 | 1388.7 | 4753.4 | 11,281 | 1,779 | C:99.6%[S:99.4%,D:0.2%],F:0.0%,M:0.4% | C:99.1%[S:98.9%,D:0.2%],F:0.2%,M:0.7% | This study |
| A. fumigatiaffinis CNM-CM6805 | 33.47 | 1,055 | 31.7 | 161.1 | 10,468 | 1,717 | C:98.7%[S:98.4%,D:0.3%],F:0.5%,M:0.8% | C:96.1%[S:95.8%,D:0.3%],F:1.2%,M:2.7% | Dos Santos et al., 2020 |
| A. novofumigatus IBT 16806 | 32.44 | 62 | 523.2 | 3768.3 | 11,534 | 2,618 | C:97.8%[S:97.6%,D:0.2%],F:0.2%,M:2.0% | C:97.9%[S:97.5%,D:0.4%],F:0.9%,M:1.2% | Kjærbølling et al., 2018 |
| A. thermomutatus HMR AF 39 | 30.94 | 647 | 47.8 | 93.3 | 9,702 | 2,396 | C:98.8%[S:98.6%,D:0.2%],F:0.5%,M:0.7% | C:94.0%[S:93.8%,D:0.2%],F:1.1%,M:4.9% | Parent-Michaud et al., 2019 |
a
C, S, D, F, and M indicate complete BUSCOs, complete single-copy BUSCOs, complete duplicated BUSCOs, fragmented BUSCOs, and missing BUSCOs, respectively.