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. 1998 Sep;36(9):2548–2553. doi: 10.1128/jcm.36.9.2548-2553.1998

TABLE 1.

Base sequences, gene locations, and predicted sizes of PCR products for the S. aureus exotoxin-specific oligonucleotide primers

Genea Primer Oligonucleotide sequence (5′→3′) Nucleotide location within gene Size of PCR product (bp)
sea SEA-3b CCT TTG GAA ACG GTT AAA ACG 487–507 127
SEA-4b TCT GAA CCT TCC CAT CAA AAA C 592–613
seb SEB-1c TCG CAT CAA ACT GAC AAA CG 634–653 477
SEB-4b GCA GGT ACT CTA TAA GTG CCT GC 1088–1110
secd SEC-3b CTC AAG AAC TAG ACA TAA AAG CTA GG 665–690 271
SEC-4b TCA AAA TCG GAT TAA CAT TAT CC 913–935
sed SED-3b CTA GTT TGG TAA TAT CTC CTT TAA ACG 354–380 319
SED-4b TTA ATG CTA TAT CTT ATA GGG TAA ACA TC 644–672
see SEE-3b CAG TAC CTA TAG ATA AAG TTA AAA CAA GC 482–510 178
SEE-2c TAA CTT ACC GTG GAC CCT TC 640–659
tst TST-3 AAG CCC TTT GTT GCT TGC G 51–69 445
TST-6 ATC GAA CTT TGG CCC ATA CTT T 474–495
eta ETA-3b CTA GTG CAT TTG TTA TTC AAG ACG 374–397 119
ETA-4b TGC ATT GAC ACC ATA GTA CTT ATT C 468–492
etb ETB-3b ACG GCT ATA TAC ATT CAA TTC AAT G 51–75 262
ETB-4 AAA GTT ATT CAT TTA ATG CAC TGT CTC 286–312
a

Sequences and locations were derived from the published nucleotide sequences for SEA (7), SEB (18), SEC1 to SEC3 (10, 13), SED (2), SEE (14), TSST-1 (8), and ETA and ETB (20). 

b

Modified oligonucleotide primers based on primer sequences published by Johnson et al. (17). 

c

Oligonucleotide primer sequences as described by Johnson et al. (17). 

d

The primer sequences used here cover all three subtypes of SEC.