Table 1.
The indices for identification of strain SWRIQ11 based on the 16S rRNA and genome analysis
| Species (Type strain) |
Similarity % (16S rRNA) | Completeness% (16S rRNA) | ANI% (EzBioCloud) | ANIb% (JSpeciesWS) | ANIm% (JSpeciesWS) | Tetra Correlation (Z-Score) | DDH or GGDC ( based on Formula 2 (Recommended)) |
|---|---|---|---|---|---|---|---|
| Pseudomonas tehranensis SWRI196 | 99.93 | 99 | 92.96 | 92.39 | 93.44 | 0.9988 |
Distance: 0.0697 DDH estimate: 50.80% |
| Pseudomonas piscicola P50 | 99.76 | 84.4 | 81.64 | 80.43 | 85.62 | 0.9669 |
Distance: 0.1694 DDH estimate: 25.70% |
| Pseudomonas bijieensis L22-9 | 99.66 | 100 | 88.04 | 87.42 | 88.97 | 0.99466 |
Distance: 0.1174 DDH estimate: 35.20% |
| Pseudomonas thivervalensis DSM 13194 | 99.52 | 100 | 87.76 | 87.28 | 88.93 | 0.98973 |
Distance: 0.1177 DDH estimate: 35.10% |
| Pseudomonas brassicacearum subsp. Brassicacearum DBK11 / CCUG:51,508 | 99.52 | 99.9 | 88.22 | 87.70 | 89.18 | 0.99399 |
Distance: 0.1157 DDH estimate: 35.60% |
| Pseudomonas corrugata ATCC 29736 / DSM:7228 | 99.44 | 98.6 | 86.08 | 85.41 | 87.66 | 0.99407 |
Distance: 0.1335 DDH estimate: 31.60% |
| Pseudomonas kilonensis DSM 13647 | 99.38 | 100 | 88.13 | 87.44 | 89.19 | 0.99298 |
Distance: 0.1154 DDH estimate: 35.70% |
| Pseudomonas viciae 11K1 | 99.31 | 100 | 88.30 | 87.69 | 89.22 | 0.99587 |
Distance: 0.1134 DDH estimate: 36.20% |
| Pseudomonas lini CFBP 5737 / DSM 16768 | 99.31 | 100 | 82.57 | 81.51 | 86.04 | 0.96318 |
Distance: 0.1627 DDH estimate: 26.60% |
| Pseudomonas chlororaphis subsp. Chlororaphis NBRC 3904 | 99.25 | 100 | 82.36 | 81.21 | 86.10 | 0.95255 |
Distance: 0.1651 DDH estimate: 26.30% |
| Pseudomonas mediterranea CFBP 5447 | 99.11 | 100 | 86.43 | 85.69 | 87.94 | 0.99189 |
Distance: 0.1313 DDH estimate: 32.10% |
| Pseudomonas mucoides P154a | 99.03 | 84.4 | 82.24 | 81.12 | 85.84 | 0.96132 |
Distance: 0.1656 DDH estimate: 26.20% |
| Pseudomonas fluorescens DSM50090 | 98.97 | 100 | 80.52 | 79.13 | 85.37 | 0.9568 |
Distance: 0.1794 DDH estimate: 24.30% [22 |
| Pseudomonas migulae NBRC 103157 | 98.97 | 100 | 82.47 | 81.33 | 86 | 0.96416 |
Distance: 0.1636 DDH estimate: 26.50% |
| Pseudomonas kielensis MBT-1 | 98.97 | 100 | 82.41 | 81.31 | 86.11 | 0.97128 |
Distance: 0.1627 DDH estimate: 26.60% |
|
Pseudomonas frederiksbergensis JAJ28 / SAMN04490185/ BS3655 LMG 19851 |
98.97 | 100 | 82.42 | 81.45 | 85.89 | 0.96646 |
Distance: 0.1636 DDH estimate: 26.50% |
| Pseudomonas taetrolens DSM 21104 | 98.9 | 100 | 78.82 | 77.32 | 84.75 | 0.90873 |
Distance: 0.1886 DDH estimate: 23.20% |
| Pseudomonas chlororaphis subsp. Aureofaciens NBRC 3521 | 98.9 | 100 | 82.34 | 81.25 | 86.18 | 0.95117 |
Distance: 0.1655 DDH estimate: 26.20% |
| Pseudomonas chlororaphis subsp. Aurantiaca DSM 19603 | 98.9 | 100 | 82.30 | 81.28 | 86.18 | 0.95328 |
Distance: 0.1643 DDH estimate: 26.40% |
| Pseudomonas chlororaphis subsp. Piscium DSM 21509 | 98.9 | 100 | 82.33 | 81.20 | 86.12 | 0.95268 |
Distance: 0.1654 DDH estimate: 26.20% |
| Pseudomonas arsenicoxydans CECT 7543 | 98.9 | 100 | 82.35 | 81.39 | 85.88 | 0.96866 |
Distance: 0.1647 DDH estimate: 26.30% |
| Pseudomonas salomonii CFBP 2022 / ICMP 14252 | 98.84 | 94.2 | 80.60 | 79.29 | 85.43 | 0.95021 |
Distance: 0.1780 DDH estimate: 24.50% |
| Pseudomonas prosekii LMG 26867 | 98.83 | 100 | 82.10 | 80.73 | 85.69 | 0.8877 |
Distance: 0.1686 DDH estimate: 25.80% |
| Pseudomonas haemolytica DSM 108987 | 98.83 | 100 | 80.55 | 79.07 | 85.50 | 0.96933 |
Distance: 0.1789 DDH estimate: 24.40% |
| Pseudomonas karstica HJ/4 / CCM 7891 | 98.76 | 99.3 | 80.65 | 79.18 | 85.41 | 0.97913 |
Distance: 0.1743 DDH estimate: 25.00% |
| Pseudomonas veronii DSM 11331 | 98.7 | 100 | 81.07 | 79.57 | 85.64 | 0.96096 |
Distance: 0.1753 DDH estimate: 24.80% |
| Pseudomonas caspiana FBF102 | 98.7 | 100 | 77.38 | 76.02 | 84.58 | 0.90133 |
Distance: 0.1957 DDH estimate: 22.40% |
| Pseudomonas spelaei SJ/9/1 / CCM 7893 | 98.69 | 99.3 | 80.77 | 79.36 | 85.48 | 0.97797 |
Distance: 0.1774 DDH estimate: 24.60% |
| Pseudomonas yamanorum 8H1 / LMG 27247 | 98.68 | 98.4 | 81.05 | 79.56 | 85.58 | 0.96659 |
Distance: 0.1749 DDH estimate: 24.90% |
| Pseudomonas marginalis ATCC 10844 / DSM 13124 | 98.67 | 92.7 | 80.96 | 79.72 | 85.64 | 0.96345 |
Distance: 0.1749 DDH estimate: 24.90% |