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. 2023 Aug 30;4(9):101174. doi: 10.1016/j.xcrm.2023.101174
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Plasma protein UKB-PPP https://www.ukbiobank.ac.uk/
Plasma protein deCODE https://www.decode.com/summarydata/
Type 2 diabetes DIAGRAM https://www.diagram-consortium.org/
Type 2 diabetes FinnGen R8 https://www.finngen.fi/fi
Body mass index GIANT https://portals.broadinstitute.org/collaboration/giant/index.php/GIANT_consortium_data_files
Body mass index Neale Lab http://www.nealelab.is/uk-biobank
Diabetic ketoacidosis FinnGen R8 https://www.finngen.fi/fi
Diabetic retinopathy FinnGen R8 https://www.finngen.fi/fi
Diabetic nephropathy FinnGen R8 https://www.finngen.fi/fi
Diabetic neuropathy FinnGen R8 https://www.finngen.fi/fi
Diabetic maculopathy FinnGen R8 https://www.finngen.fi/fi
Diabetic hypoglycemia FinnGen R8 https://www.finngen.fi/fi
Diabetes peripheral circulatory complications FinnGen R8 https://www.finngen.fi/fi
Cardiomyopathy FinnGen R8 https://www.finngen.fi/fi
Coronary artery disease CARDIoGRAMplusC4D http://www.cardiogramplusc4d.org/
Ischemic stroke Malik et al.15 https://www.ebi.ac.uk/gwas/publications/29531354
1000 Genomes European reference 1000 Genomes https://www.internationalgenome.org/data/

Software and algorithms

TwoSampleMR Github https://mrcieu.github.io/TwoSampleMR/
MendelianRandomization R project https://cran.r-project.org/web/packages/MendelianRandomization/index.html
Coloc R package Github https://github.com/chr1swallace/coloc
SuSiE R package Github https://stephenslab.github.io/susieR/
GeneMANIA GeneMANIA https://genemania.org/