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. 2023 Sep 25;14:5979. doi: 10.1038/s41467-023-41633-8

Fig. 3. CTD structure in the dilute phase.

Fig. 3

a Hydrodynamic radius Rh of 3R-CTD from NMR, DLS, and the ensemble of structures shown in (b). Error bars in panel (a) represent two times std. b, c Ensemble of low energy structures of 3R-CTD calculated with Rosetta using NMR restraints. Individual structures are colored from blue to purple. Contacts between Pro and Tyr residues are highlighted in (c). d, e Selected structure of yCTD from the ensemble of yCTD conformations generated by hierarchical chain growth (HCG) with the help of NMR data. A 21-residue fragment comprising three conserved heptad repeats is shown with side-chains. Residue numbering in (e) starts with the N-terminal Tyr of the 21-residue fragment. f Hydrodynamic radii Rh of hCTD and yCTD at increasing temperatures in the dilute phase (25 μM concentration of hCTD/yCTD). Error bars represent two times std for independent NMR diffusion measurements (n = 3). The curves describe the predicted tendency of Rh as a function of the number of residues for fully denatured, intrinsically disordered (IDP), and folded proteins24. g Histogram distribution of Rh values for the HCG structures of yCTD compared with the experimental value at 5 °C (red dashed line).