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. 2023 Aug 28;8(10):1911–1919. doi: 10.1038/s41564-023-01461-4

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 4 — A) Heatmap color shows samples (n = 609, columns) and loci (n = 1395, rows) coverage retained after filtering (Extended Data Fig. 3) for downstream analysis. B) Distribution of retained SNPs across Plasmodium falciparum chromosomes. The plot shows distribution of 1395 retained high quality biallelic SNPs across the 14 P. falciparum chromosomes within 0.025 Mb window size. Color coded from light grey for masked regions with no SNPs to red for regions containing high number SNPs per chromosome.