Figure 4. Similarity of the R1R2_23_Ac structure to the disease-derived Pick’s disease fibril.

A. Schematic illustrating the R1R2_23_Ac core sequence (top). View of the core of the R1R2_23_Ac fragment highlighting the 2-fold “interface A” interaction (bottom). Acetylation sites are shown in black. Fragments are colored as in Figure 1A. Structure is shown as spheres with Ca and is colored as in Figure 1A. B. Illustration of a monomer layer from a protofilament of a PiD fibril (PDB id 6gx5) encoding residues 254–376. Structure and schematic is colored as in Figure 1A. Structure is shown as spheres with C-a. C. Overlay of the R1R2 23_Ac core fragment (one chain) with the equivalent sequence in the PiD structure reveals 1.8 Å C-a atom rmsd (top). Comparison of the equivalent sequences in PiD and R1R2_23 _Ac that were aligned (bottom). PiD and R1R2_23_Ac structures/sequence are colored grey and red/green, respectively. Acetylated lysines are colored in black. The structures are shown as spheres with backbone-only. D. Full-atom alignment of the R1R2_23_Ac to the homologous region in the PiD structure. Key residues from the ²⁷⁵VQIINK²⁸⁰ and ³⁰⁶VQIVYK³¹¹ motifs are highlighted. Residues are numbered according to the 4R nomenclature and colored as in Figure 4C. Structures are shown in space fill with all-atoms.