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. 2023 Sep 13;24(18):14050. doi: 10.3390/ijms241814050

Table 1.

List of DT pairs arranged in increasing hyperbolic distance involved in the same metabolic pathways and inhibited by the same class of drugs.

DT_a DT_b dH2 Pathway of DT_a Pathway of DT_b Common Drug
embB/embA 4.95 mtu00572: Arabinogalactan
biosynthesis—Mycobacterium
mtu00572: Arabinogalactan biosynthesis—Mycobacterium Ethambutol
fbiC/fbiB 9.49 mtu01100: Metabolic pathways,
mtu00680: Methane metabolism,
mtu01120: Microbial metabolism in diverse environments
mtu01100: Metabolic pathways, mtu01120: Microbial metabolism in diverse environments, mtu00680: Methane metabolism Delamanid, Pretomanid
ddl/alr 12.38 mtu00470: D-Amino acid metabolism,
mtu00550: Peptidoglycan biosynthesis,
mtu01502: Vancomycin resistance,
mtu01100: Metabolic pathways
mtu01502: Vancomycin resistance, mtu01100: Metabolic pathways, mtu00470: D-Amino acid metabolism Cycloserine, Terizidone
rpoC/rpoB 14.21 mtu03020: RNA polymerase mtu03020: RNA polymerase Rifabutin, Rifalazil, Rifampicin, Rifamycin, Rifapentine
rpoZ/rpoC 14.63 mtu03020: RNA polymerase mtu03020: RNA polymerase Rifabutin, Rifalazil, Rifampicin, Rifamycin, Rifapentine
rpoB/rpoA 14.65 mtu03020: RNA polymerase mtu03020: RNA polymerase Rifabutin, Rifalazil, Rifampicin, Rifamycin, Rifapentine
rplD/rplC 15.30 mtu03010: Ribosome mtu03010: Ribosome Linezolid, Sutezolid
rpoC/rpoA 16.85 mtu03020: RNA polymerase mtu03020: RNA polymerase Rifabutin, Rifalazil, Rifampicin, Rifamycin, Rifapentine
rpoZ/rpoB 18.16 mtu03020: RNA polymerase mtu03020: RNA polymerase Rifabutin, Rifalazil, Rifampicin, Rifamycin, Rifapentine
rpoZ/rpoA 20.68 mtu03020: RNA polymerase mtu03020: RNA polymerase Rifabutin, Rifalazil, Rifampicin, Rifamycin, Rifapentine
folC/ribD 23.12 mtu00790: Folate biosynthesis, mtu01240: Biosynthesis of cofactors, mtu01100: Metabolic pathways mtu01240: Biosynthesis of cofactors, mtu02024: Quorum sensing, mtu00740: Riboflavin metabolism, mtu01100: Metabolic pathways, mtu01110: Biosynthesis of secondary metabolites Aminosalicylic acid
glcB/menB 25.86 mtu01120: Microbial metabolism in diverse environments, mtu01200: Carbon metabolism, mtu00630: Glyoxylate and dicarboxylate metabolism, mtu01110: Biosynthesis of secondary metabolites, mtu01100: Metabolic pathways, mtu00620: Pyruvate metabolism mtu01110: Biosynthesis of secondary metabolites, mtu00130: Ubiquinone and other terpenoid-quinone biosynthesis, mtu01240: Biosynthesis of cofactors, mtu01100: Metabolic pathways Coenzyme A
fbiB/fbiA 25.96 mtu01100: Metabolic pathways, mtu01120: Microbial metabolism in diverse environments, mtu00680: Methane metabolism mtu01240: Biosynthesis of cofactors, mtu01120: Microbial metabolism in diverse environments, mtu01100: Metabolic pathways, mtu00680: Methane metabolism Delamanid, Pretomanid
fbiC/fbiA 26.21 mtu01100: Metabolic pathways, mtu00680: Methane metabolism, mtu01120: Microbial metabolism in diverse environments mtu01240: Biosynthesis of cofactors,
mtu01120: Microbial metabolism in diverse environments,
mtu01100: Metabolic pathways,
mtu00680: Methane metabolism
Delamanid, Pretomanid