TABLE 2.
Sizes of the restriction fragments used for RFLP analysis
Primers used to amplify fragment | Restriction enzyme | Size(s) of fragment(s) in genes coding for B subunit (bp)
|
||||
---|---|---|---|---|---|---|
VT2 | VT2c
|
VT2d
|
||||
VT2vh-a | VT2vh-b | VT2d-Ount | VT2d-OX3a | |||
VT2-c, VT2-da | HaeIII | 285 | 161, 124 | 161, 124 | ||
RsaI | 216, 69 | 136, 80 (69)b | 216, 69 | |||
NciI | 285 | 285 | 159, 126 | |||
VT2-e, VT2-f | HaeIII | 348 | 216, 132 | 216, 132 | 216, 132 | 167, 132 (49)b |
PvuII | 323 (25)b | 323 (25)b | 250, 73 (25)b | 200, 120 (28)b | 200, 120 (28)b |
This primer pair was used according to the method of Tyler et al. (38).
This fragment did not resolve or was too small to be clearly visible under the electrophoresis conditions used.