Table 2.

An estimate of genetic variability and neutrality indices of Lasiodiplodia species. S: The number of segregating sites, h: The number of haplotypes, Hd: The haplotype diversity, π: Nucleotide diversity. R_M: the minimum number of recombination events, Z_nS: Kelly’s Z_Ns [62], ZZ: Rozas’ ZZ [65]. Statistical significance: * p < 0.05; ** p < 0.01.

	S	h	Hd	π (×10−3)	ZnS	ZZ	RM	Fu and Li’s D *	Tajima’s D
L. theobromae
ITS	2	3	0.12	0.24	0.00	0.00	0	0.72	−1.19
SSU	18	11	0.29	0.66	0.11	0.22	0	−4.76 *	−2.51 **
EF1	31	12	0.70	3.99	0.17	0.13	2	−1.22	−2.08 *
TUB	6	6	0.24	0.70	0.07	0.13	0	−0.63	−1.84 *
Combined dataset	57	27	0.87	1.36	0.07	0.24	3	−2.66 *	−2.41 **
L. brasiliensis
ITS	6	6	0.80	3.73	0.54	0.12	1	−0.44	−0.23
SSU	11	3	0.35	1.98	0.82	0.08	0	−2.43 *	−2.01 *
EF1	6	2	0.18	1.85	1.00	0.00	0	−2.21 *	−1.85 *
TUB	2	2	0.18	0.81	1.00	0.00	0	−1.66	−1.43
Combined dataset	25	7	0.87	2.11	0.32 **	0.38	1	−2.12 *	−1.70
L. hormozganensis
ITS	6	6	0.86	3.46	0.13	−0.06	0	1.26	0.09
SSU	6	6	0.49	2.30	0.15	0.14	0	−3.03 *	−2.15 **
EF1	2	2	0.11	0.38	1.00	0.00	0	−1.99	−1.51
TUB	6	5	0.66	3.06	0.17	0.15	0	−0.10	−0.70
Combined dataset	22	13	0.95	1.68	0.10	0.14	1	−1.23	−1.30
L. pseudotheobromae
ITS	2	2	0.15	0.60	ND	ND	0	−1.78	−1.47
SSU	15	7	0.73	3.12	0.31	0.05	0	−1.37	−1.45
EF1	15	7	0.73	3.12	0.31	0.05	0	−1.37	−1.45
TUB	3	2	0.15	1.03	1.00	0.00	0	−2.02	−1.65
Combined dataset	26	10	0.95	2.04	0.19	0.21	1	−1.91	−1.65
L. rubropurpurea
ITS	1	2	0.14	0.28	ND	ND	0	0.61	−0.73
SSU	13	6	0.40	1.21	0.48	0.22	1	−3.20 *	−2.16 *
EF1	44	8	0.84	13.90	0.61	0.18	1	1.49 *	−1.12
TUB	2	3	0.15	0.33	0.00 **	0.00	0	−2.22	−1.51
Combined dataset	60	16	0.90	6.11	0.36	0.35	4	0.16	−1.48
L. iranensis
ITS	−	1	−	−	−	−	−	−	−
SSU	13	6	0.40	1.21	0.48	0.22	1	−3.20 *	−2.16 *
EF1	18	5	0.67	9.59	0.37	−0.04	0	−0.99	−0.61
TUB	8	9	0.91	6.58	0.22	−0.05	1	0.02	0.17
Combined dataset	37	13	0.99	3.72	0.18	0.20	2	−1.29	−0.90