Table 2.
Overview of the general functional categories of the identified archaeal proteome shown in relative abundance.
| Category | Relative abundance [%] | Value of p (Kruskal-Wallis) | Significance code | |||
|---|---|---|---|---|---|---|
| Naive | sd | H1N1 | sd | |||
| Energy production and conversion | 24.85 | 4.49 | 19.51 | 3.50 | 0.05 | * |
| Amino acid transport and metabolism | 18.02 | 6.63 | 24.06 | 6.05 | 0.08 | |
| Function unknown | 12.79 | 4.53 | 15.49 | 2.68 | 0.18 | |
| Coenzyme transport and metabolism | 12.78 | 4.29 | 10.26 | 4.31 | 0.18 | |
| Translation, ribosomal structure, and biogenesis | 8.57 | 4.86 | 4.85 | 2.79 | 0.13 | |
| Posttranslational modification, protein turnover, chaperones | 7.00 | 3.23 | 4.93 | 1.70 | 0.08 | |
| Carbohydrate transport and metabolism | 3.48 | 0.82 | 4.27 | 1.37 | 0.21 | |
| Unclassified | 2.57 | 1.44 | 4.32 | 3.81 | 0.32 | |
| Replication, recombination and repair | 2.81 | 1.71 | 2.44 | 1.53 | 0.89 | |
| Transcription | 1.45 | 1.67 | 3.22 | 2.43 | 0.05 | * |
| Lipid transport and metabolism | 1.20 | 0.69 | 1.99 | 1.39 | 0.32 | |
| Nucleotide transport and metabolism | 1.75 | 1.47 | 0.93 | 0.42 | 0.21 | |
| Cell wall/membrane/envelope biogenesis | 1.05 | 0.58 | 1.29 | 0.84 | 0.32 | |
| Inorganic ion transport and metabolism | 0.90 | 0.44 | 1.07 | 0.62 | 0.32 | |
| Defense mechanisms | 0.46 | 0.43 | 0.34 | 0.29 | 0.60 | |
| Signal transduction mechanisms | 0.16 | 0.28 | 0.47 | 0.63 | 0.05 | * |
| Secondary metabolites biosynthesis, transport, and catabolism | 0.00 | 0.00 | 0.32 | 0.47 | 0.05 | * |
| Cell cycle control, cell division, chromosome partitioning | 0.15 | 0.34 | 0.12 | 0.38 | 0.61 | |
| Intracellular trafficking, secretion, and vesicular transport | 0.00 | 0.00 | 0.11 | 0.23 | 0.21 | |
(Mean values and standard deviation) and structured by the treatment [healthy (naïve, n = 3), infected (H1N1, n = 3)] and significance parameters (Kruskal-Wallis, p < 0.05).