Table 2.
Phylum (GUS Abundance %) |
GUS Loop Classification | Localization | References |
---|---|---|---|
Bacteroidetes (52%) | L2 | Transported across the inner microbial membrane | [31,38,39] |
mL1 | Periplasmic space | ||
mL2 | Transported across the inner microbial membrane | ||
NL | Periplasmic space | ||
rare mL1,2 | Transported across the inner microbial membrane | ||
Firmicutes (41%) | L1 | Intracellular | [31,38,39] |
L2 | Transported across the inner microbial membrane | ||
NL | Periplasmic space | ||
mL1 | Periplasmic space | ||
Verrucomicrobia (1.5%) | mL2 | Transported across the inner microbial membrane | [31,38,39] |
Proteobacteria (4%) | L1 | Intracellular | [31,38,39] |
NL: No Loop < 10 residues in Loop 1 region; <9 residues in Loop 2 region. Loop 1 (L1) > 15 residue in Loop 1 region of EcGUS; <9 residues in Loop 2 region. Mini-loop 1 (mL1) contains a loop of 10–15 residues in Loop 1 region; <9 residues in Loop 2 region. Loop 2 (L2) < 10 residue in Loop 1 region; >12 residues in Loop 2 region. Mini-loop 2 (mL2) < 10 residues in Loop 1 region; >9 and <12 residues in Loop 2 region. Mini-loop 1,2 (mL1,2) contain a loop of 10–15 residues in Loop 1 region; >9 and <12 residues in Loop 2 region.