TABLE 3.
Reproducibility of phenotypic resistance testing in the MT4-MTT cell viability assaya
| Sample no. and drug | IC50 (μM)
|
Fold resistanceb
|
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Determin. 1 | Determin. 2 | Determin. 3 | Determin. 4 | Mean | SEM (n = 4)c | CVd | Determin. 1 | Determin. 2 | Determin. 3 | Determin. 4 | Mean | SEM (n = 4) | CV | |
| 10 | ||||||||||||||
| AZT | 13.6 | 3.70 | 6.50 | 12.5 | 9.1 | 2.38 | 0.26 | 211 | 79 | 137 | 192 | 155 | 30 | 0.19 |
| Tivirapine | 0.47 | 0.32 | 0.44 | 0.51 | 0.4 | 0.04 | 0.09 | 30 | 23 | 31 | 37 | 30 | 3 | 0.09 |
| Loviride | 0.31 | 0.28 | 0.36 | 0.41 | 0.3 | 0.03 | 0.08 | 8 | 9 | 11 | 8 | 9 | 1 | 0.08 |
| ddI | 8.10 | 8.20 | 8.70 | 12.8 | 9.5 | 1.12 | 0.12 | 1 | 2 | 2 | 2 | 2 | 0.3 | 0.14 |
| ddC | 7.50 | 8.30 | 8.90 | 9.20 | 8.5 | 0.37 | 0.04 | 2 | 2 | 3 | 3 | 3 | 0.3 | 0.12 |
| d4T | 10.0 | 3.20 | 5.40 | 9.20 | 7.0 | 1.60 | 0.23 | 2 | 2 | 3 | 3 | 3 | 0.3 | 0.12 |
| 3TC | >100 | >100 | >100 | >100 | >100 | NDe | ND | >17 | >10 | >10 | >13 | >12 | ND | |
| 20 | ||||||||||||||
| Indinavir | 0.15 | 0.63 | 0.42 | 0.26 | 0.4 | 0.10 | 0.29 | 18 | 8 | 12 | 6 | 11 | 3 | 0.24 |
| Ritonavir | 0.56 | 1.71 | 1.72 | 0.38 | 1.1 | 0.36 | 0.33 | 22 | 20 | 21 | 10 | 18 | 3 | 0.15 |
| Saquinavir | 0.23 | 0.37 | 0.40 | 0.15 | 0.3 | 0.06 | 0.20 | 82 | 37 | 71 | 21 | 53 | 14 | 0.27 |
The PR and RT inhibitor resistance profiles were determined for four different recombinant viruses separately generated from the same plasma sample (sample 10 or 20). The profiles of the susceptibilities of the respective viruses to seven RT inhibitors (sample 10) and three PR inhibitors (sample 20) are expressed as IC50s and as the means of these determinations (Determin.). The same results are also expressed as fold resistance values.
Fold increase in the mean IC50 relative to the mean IC50 for the wild type. The mean IC50 for both viruses from patients and wild-type viruses is derived from two to four separate susceptibility determinations by the MT4-MTT assay.
SEM, standard error of the mean.
CV, coefficient of variation.
ND, not determined.