Table 4. Characteristics and studied indices of RAPD primers used in the study of genetic diversity of mango genotypes.
| Primer | Na | P | He | PIC | Havp | EMR | MI | D | NEA | H | S |
|---|---|---|---|---|---|---|---|---|---|---|---|
| OPM_20 | 21 | 15 | 0.477 | 0.380 | 0.002 | 5.882 | 0.011 | 0.847 | 1.488 | 0.295 | 0.454 |
| OPQ_05 | 24 | 22 | 0.500 | 0.368 | 0.001 | 11.059 | 0.015 | 0.748 | 1.634 | 0.359 | 0.532 |
| OPS_17 | 19 | 15 | 0.484 | 0.376 | 0.002 | 6.176 | 0.012 | 0.831 | 1.473 | 0.290 | 0.450 |
| OPD_20 | 19 | 13 | 0.477 | 0.379 | 0.002 | 5.118 | 0.011 | 0.846 | 1.494 | 0.281 | 0.428 |
| OPO_12 | 6 | 5 | 0.494 | 0.371 | 0.006 | 2.235 | 0.013 | 0.803 | 1.603 | 0.368 | 0.553 |
| OPA_13 | 11 | 7 | 0.470 | 0.383 | 0.004 | 2.647 | 0.010 | 0.859 | 1.403 | 0.264 | 0.420 |
| OPB_11 | 10 | 10 | 0.496 | 0.371 | 0.003 | 4.529 | 0.013 | 0.796 | 1.534 | 0.304 | 0.513 |
| OPJ_20 | 14 | 12 | 0.500 | 0.369 | 0.002 | 5.824 | 0.014 | 0.766 | 1.583 | 0.347 | 0.524 |
| OPA_09 | 13 | 12 | 0.481 | 0.378 | 0.002 | 4.824 | 0.011 | 0.840 | 1.484 | 0.303 | 0.470 |
| OPX_18 | 14 | 14 | 0.487 | 0.375 | 0.002 | 8.118 | 0.017 | 0.665 | 1.527 | 0.328 | 0.501 |
| OPM_06 | 16 | 12 | 0.500 | 0.369 | 0.002 | 6.176 | 0.015 | 0.736 | 1.578 | 0.341 | 0.512 |
| OPM_12 | 13 | 9 | 0.500 | 0.368 | 0.003 | 4.471 | 0.015 | 0.755 | 1.643 | 0.377 | 0.560 |
| OPD_13 | 18 | 13 | 0.486 | 0.375 | 0.002 | 7.000 | 0.017 | 0.661 | 1.605 | 0.356 | 0.532 |
| OPM_15 | 14 | 14 | 0.496 | 0.370 | 0.002 | 6.412 | 0.013 | 0.791 | 1.600 | 0.347 | 0.518 |
| OPG_11 | 8 | 7 | 0.484 | 0.376 | 0.004 | 4.118 | 0.017 | 0.656 | 1.598 | 0.338 | 0.501 |
| OPH_18 | 19 | 18 | 0.490 | 0.373 | 0.002 | 7.706 | 0.012 | 0.818 | 1.517 | 0.312 | 0.478 |
| OPB_17 | 9 | 6 | 0.457 | 0.389 | 0.004 | 2.118 | 0.009 | 0.878 | 1.455 | 0.285 | 0.445 |
| OPA_04 | 16 | 12 | 0.477 | 0.380 | 0.002 | 4.706 | 0.011 | 0.847 | 1.479 | 0.287 | 0.441 |
| OPE_12 | 17 | 14 | 0.489 | 0.374 | 0.002 | 5.941 | 0.012 | 0.821 | 1.469 | 0.297 | 0.460 |
| OPA_01 | 10 | 8 | 0.415 | 0.407 | 0.003 | 5.647 | 0.017 | 0.503 | 1.693 | 0.386 | 0.562 |
| OPX_08 | 17 | 12 | 0.499 | 0.369 | 0.002 | 5.765 | 0.014 | 0.770 | 1.637 | 0.369 | 0.547 |
| OPX_17 | 16 | 13 | 0.491 | 0.373 | 0.002 | 5.647 | 0.013 | 0.812 | 1.472 | 0.287 | 0.447 |
| OPX_02 | 6 | 2 | 0.484 | 0.376 | 0.014 | 0.824 | 0.012 | 0.838 | 1.567 | 0.325 | 0.492 |
| OPX_01 | 10 | 10 | 0.457 | 0.389 | 0.003 | 3.529 | 0.009 | 0.877 | 1.359 | 0.232 | 0.373 |
| OPA_18 | 26 | 22 | 0.420 | 0.405 | 0.001 | 6.588 | 0.007 | 0.911 | 1.392 | 0.248 | 0.393 |
| OPA_07 | 14 | 14 | 0.480 | 0.378 | 0.002 | 5.588 | 0.011 | 0.842 | 1.456 | 0.283 | 0.441 |
| OPA_11 | 17 | 16 | 0.457 | 0.389 | 0.002 | 5.647 | 0.009 | 0.876 | 1.439 | 0.275 | 0.431 |
| OPW_11 | 20 | 20 | 0.497 | 0.370 | 0.001 | 9.176 | 0.013 | 0.790 | 1.588 | 0.352 | 0.529 |
| OPC_05 | 11 | 9 | 0.479 | 0.378 | 0.003 | 3.588 | 0.011 | 0.843 | 1.451 | 0.272 | 0.423 |
| OPK_10 | 6 | 6 | 0.491 | 0.373 | 0.005 | 2.588 | 0.012 | 0.816 | 1.518 | 0.318 | 0.488 |
| Average | 14.5 | 12.03 | 0.480 | 0.378 | 0.003 | 5.322 | 0.013 | 0.795 | 1.525 | 0.314 | 0.481 |
| polymorphism 83% | |||||||||||
Notes.
- NA
- Total bands
- P
- polymorphic bands
- He
- Expected heterozygosity
- PIC
- Polymorphism information content
- EMR
- Effective multiplex ratio
- Havp
- Mean heterozygosity
- MI
- Marker index
- D
- Discriminating power
- NEA
- Number of effective alleles
- H
- Nei’s gene diversity
- S
- Shannon’s Information index