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. 2023 Sep 28;11:e15722. doi: 10.7717/peerj.15722

Table 4. Characteristics and studied indices of RAPD primers used in the study of genetic diversity of mango genotypes.

Primer Na P He PIC Havp EMR MI D NEA H S
OPM_20 21 15 0.477 0.380 0.002 5.882 0.011 0.847 1.488 0.295 0.454
OPQ_05 24 22 0.500 0.368 0.001 11.059 0.015 0.748 1.634 0.359 0.532
OPS_17 19 15 0.484 0.376 0.002 6.176 0.012 0.831 1.473 0.290 0.450
OPD_20 19 13 0.477 0.379 0.002 5.118 0.011 0.846 1.494 0.281 0.428
OPO_12 6 5 0.494 0.371 0.006 2.235 0.013 0.803 1.603 0.368 0.553
OPA_13 11 7 0.470 0.383 0.004 2.647 0.010 0.859 1.403 0.264 0.420
OPB_11 10 10 0.496 0.371 0.003 4.529 0.013 0.796 1.534 0.304 0.513
OPJ_20 14 12 0.500 0.369 0.002 5.824 0.014 0.766 1.583 0.347 0.524
OPA_09 13 12 0.481 0.378 0.002 4.824 0.011 0.840 1.484 0.303 0.470
OPX_18 14 14 0.487 0.375 0.002 8.118 0.017 0.665 1.527 0.328 0.501
OPM_06 16 12 0.500 0.369 0.002 6.176 0.015 0.736 1.578 0.341 0.512
OPM_12 13 9 0.500 0.368 0.003 4.471 0.015 0.755 1.643 0.377 0.560
OPD_13 18 13 0.486 0.375 0.002 7.000 0.017 0.661 1.605 0.356 0.532
OPM_15 14 14 0.496 0.370 0.002 6.412 0.013 0.791 1.600 0.347 0.518
OPG_11 8 7 0.484 0.376 0.004 4.118 0.017 0.656 1.598 0.338 0.501
OPH_18 19 18 0.490 0.373 0.002 7.706 0.012 0.818 1.517 0.312 0.478
OPB_17 9 6 0.457 0.389 0.004 2.118 0.009 0.878 1.455 0.285 0.445
OPA_04 16 12 0.477 0.380 0.002 4.706 0.011 0.847 1.479 0.287 0.441
OPE_12 17 14 0.489 0.374 0.002 5.941 0.012 0.821 1.469 0.297 0.460
OPA_01 10 8 0.415 0.407 0.003 5.647 0.017 0.503 1.693 0.386 0.562
OPX_08 17 12 0.499 0.369 0.002 5.765 0.014 0.770 1.637 0.369 0.547
OPX_17 16 13 0.491 0.373 0.002 5.647 0.013 0.812 1.472 0.287 0.447
OPX_02 6 2 0.484 0.376 0.014 0.824 0.012 0.838 1.567 0.325 0.492
OPX_01 10 10 0.457 0.389 0.003 3.529 0.009 0.877 1.359 0.232 0.373
OPA_18 26 22 0.420 0.405 0.001 6.588 0.007 0.911 1.392 0.248 0.393
OPA_07 14 14 0.480 0.378 0.002 5.588 0.011 0.842 1.456 0.283 0.441
OPA_11 17 16 0.457 0.389 0.002 5.647 0.009 0.876 1.439 0.275 0.431
OPW_11 20 20 0.497 0.370 0.001 9.176 0.013 0.790 1.588 0.352 0.529
OPC_05 11 9 0.479 0.378 0.003 3.588 0.011 0.843 1.451 0.272 0.423
OPK_10 6 6 0.491 0.373 0.005 2.588 0.012 0.816 1.518 0.318 0.488
Average 14.5 12.03 0.480 0.378 0.003 5.322 0.013 0.795 1.525 0.314 0.481
polymorphism 83%

Notes.

NA
Total bands
P
polymorphic bands
He
Expected heterozygosity
PIC
Polymorphism information content
EMR
Effective multiplex ratio
Havp
Mean heterozygosity
MI
Marker index
D
Discriminating power
NEA
Number of effective alleles
H
Nei’s gene diversity
S
Shannon’s Information index