Table 5. Characteristics and studied indices of SSR primers used in the study of genetic diversity of mango cultivars.
| Primer | NA | P | He | PIC | Havp | EMR | MI | D | NEA | H | S |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MiSHRS_1 | 5 | 5 | 0.767 | 0.748 | 0.047 | 1.412 | 0.066 | 0.815 | 1.361 | 0.254 | 0.414 |
| MiSHRS_4 | 5 | 5 | 0.720 | 0.700 | 0.056 | 1.765 | 0.099 | 0.765 | 1.448 | 0.282 | 0.446 |
| MiSHRS_18 | 4 | 4 | 0.681 | 0.649 | 0.080 | 1.647 | 0.131 | 0.724 | 1.580 | 0.334 | 0.495 |
| MiSHRS_32 | 7 | 7 | 0.749 | 0.733 | 0.036 | 1.706 | 0.061 | 0.796 | 1.311 | 0.204 | 0.338 |
| mMiCIR _36 | 4 | 4 | 0.618 | 0.590 | 0.095 | 1.529 | 0.146 | 0.657 | 1.460 | 0.282 | 0.437 |
| MiSHRS_48 | 5 | 5 | 0.745 | 0.724 | 0.051 | 1.176 | 0.060 | 0.792 | 1.295 | 0.214 | 0.361 |
| LMMA_1 | 9 | 9 | 0.829 | 0.818 | 0.019 | 1.765 | 0.034 | 0.881 | 1.246 | 0.178 | 0.305 |
| LMMA_7 | 7 | 7 | 0.785 | 0.770 | 0.031 | 1.882 | 0.058 | 0.834 | 1.351 | 0.231 | 0.374 |
| LMMA_8 | 8 | 8 | 0.770 | 0.753 | 0.029 | 1.941 | 0.056 | 0.818 | 1.322 | 0.202 | 0.332 |
| LMMA_9 | 5 | 5 | 0.749 | 0.729 | 0.050 | 1.471 | 0.074 | 0.796 | 1.384 | 0.258 | 0.418 |
| LMMA_10 | 8 | 8 | 0.782 | 0.768 | 0.027 | 2.000 | 0.054 | 0.831 | 1.324 | 0.209 | 0.344 |
| LMMA_11 | 6 | 6 | 0.807 | 0.793 | 0.032 | 1.765 | 0.057 | 0.857 | 1.379 | 0.263 | 0.426 |
| LMMA_13 | 5 | 5 | 0.749 | 0.727 | 0.050 | 1.529 | 0.077 | 0.795 | 1.404 | 0.268 | 0.425 |
| LMMA_14 | 7 | 7 | 0.793 | 0.779 | 0.030 | 1.765 | 0.052 | 0.843 | 1.328 | 0.222 | 0.366 |
| LMMA_15 | 6 | 6 | 0.719 | 0.696 | 0.047 | 1.882 | 0.088 | 0.764 | 1.410 | 0.247 | 0.386 |
| mMiCIR_5 | 6 | 6 | 0.751 | 0.730 | 0.041 | 1.824 | 0.076 | 0.798 | 1.415 | 0.256 | 0.400 |
| mMiCIR_8 | 8 | 8 | 0.839 | 0.829 | 0.020 | 1.941 | 0.039 | 0.892 | 1.306 | 0.219 | 0.366 |
| mMiCIR_9 | 6 | 6 | 0.793 | 0.777 | 0.021 | 3.039 | 0.063 | 0.952 | 1.399 | 0.267 | 0.371 |
| mMiCIR_18 | 9 | 9 | 0.838 | 0.829 | 0.018 | 1.471 | 0.026 | 0.891 | 1.196 | 0.152 | 0.274 |
| mMiCIR_21 | 5 | 5 | 0.524 | 0.510 | 0.095 | 0.882 | 0.084 | 0.557 | 1.233 | 0.150 | 0.257 |
| mMiCIR_22 | 7 | 7 | 0.814 | 0.801 | 0.027 | 1.647 | 0.044 | 0.865 | 1.296 | 0.213 | 0.358 |
| mMiCIR_25 | 5 | 5 | 0.675 | 0.655 | 0.065 | 1.176 | 0.076 | 0.717 | 1.305 | 0.204 | 0.340 |
| MiSHRS _29 | 5 | 5 | 0.584 | 0.561 | 0.083 | 1.588 | 0.132 | 0.621 | 1.273 | 0.193 | 0.325 |
| mMiCIR_29 | 9 | 9 | 0.827 | 0.817 | 0.019 | 1.765 | 0.034 | 0.878 | 1.245 | 0.177 | 0.305 |
| mMiCIR_30 | 6 | 6 | 0.782 | 0.766 | 0.036 | 1.765 | 0.064 | 0.831 | 1.385 | 0.256 | 0.411 |
| MIAC_2 | 5 | 5 | 0.692 | 0.666 | 0.062 | 1.353 | 0.083 | 0.735 | 1.360 | 0.232 | 0.371 |
| MIAC_3 | 7 | 7 | 0.752 | 0.733 | 0.035 | 1.294 | 0.046 | 0.799 | 1.235 | 0.166 | 0.285 |
| MIAC_4 | 4 | 4 | 0.737 | 0.713 | 0.053 | 1.529 | 0.081 | 0.783 | 1.511 | 0.332 | 0.513 |
| MIAC_5 | 10 | 10 | 0.860 | 0.852 | 0.014 | 1.647 | 0.023 | 0.913 | 1.197 | 0.154 | 0.276 |
| MIAC_6 | 9 | 9 | 0.831 | 0.821 | 0.019 | 1.765 | 0.033 | 0.883 | 1.245 | 0.178 | 0.306 |
| Average | 6.4 | 6.4 | 0.752 | 0.735 | 0.043 | 1.664 | 0.067 | 0.803 | 1.340 | 0.227 | 0.369 |
| Polymorphism 100% | |||||||||||
Notes.
- NA
- Total bands
- P
- polymorphic bands
- He
- Expected heterozygosity
- PIC
- Polymorphism information content
- EMR
- Effective multiplex ratio
- Havp
- Mean heterozygosity
- MI
- Marker index
- D
- Discriminating power
- NEA
- Number of effective alleles
- H
- Nei’s gene diversity
- S
- Shannon’s Information index