Fig. 11.

Problem 3, recombinations minimization performance benchmarks. Plots analogous to Fig. 10. Runtime in seconds (upper panels) and peak PSS in MB (lower panels), as a function of the number of markers (left) and of the ratio of duplications (right). For each experiment, the remaining parameters are fixed as indicated above. The abbreviations read as follows: Nh number of haplotypes; Nm, number of markers; Rd ratio of duplications; and Ri, ratio of inverted duplications