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. 2023 Sep 15;26(10):107925. doi: 10.1016/j.isci.2023.107925

Table 1.

Content of enzymes involved in pectin degradation (polygalacturonases (PG); rhamnogalacturonan hydrolases, (RGH); polygalacturonate lyases, (PL)) and pectin remodeling (pectin methylesterases (PME) and pectin acetylesterases, (PAE)) in archetype strains of soil-dwelling bacilli

Pectin degradation
Pectin remodeling

PG RGH PL PME PAE TOTAL
B. altitudinis CHB19 1 1 2a 1 1 6
B. atrophaeus GQJK17 0 2 6a 0 3 11
B. clausii DSM8716 0 2 4a 0 0 6
B. licheniformis ATCC-14180 1 2 8a 1 4 16
B. mycoides KBAB4 0 0 0 0 0 0
B. paralicheniformis CBMAI1303 1 2 8a 1 4 16
B. pumilus SAFR032 1 1 2a 1 1 6
B. simplex SH-B26 0 0 0 0 0 0
B. subtilis 168 0 2 7a 0 3 12
B. thuringiensis CT-43 0 0 0 0 0 0
B. velezensis GA1/FZB42 0 0 3a 0 0 3
B. weihenstephanensis WSBC 10204 0 0 0 0 0 0

Enzymes are grouped by family following the classification established in the CAZy database.104

a

means that one or several protein sequences are referred as domain of unknown function (DUF), unknown protein, hypothetical protein or putative protein. See also Table S1.