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. 2023 Apr 3;42(1):99–108. doi: 10.1038/s41587-023-01728-5

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 7 — (a) The velocities derived from cellDancer for human embryo glutamatergic neurogenesis are visualized on the UMAP embedding based on spliced reads (left), and on the UMAP embedding based on the spliced and unspliced reads (right). (b) Gene-shared pseudotime projected on UMAP shows the order of cell development during neurogenesis. (c) RNA velocities predicted by cellDancer are projected onto the phase portraits for a set of selected genes.