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. 2023 May 17;28(10):e910–e920. doi: 10.1093/oncolo/oyad120

Table 1.

Clinical features and select pathogenic genomic alteration frequencies in 8728 UCB specimens.

EAS Non-EAS P value SAS Non-SAS P value EAS EUR P value SAS EUR P value
n 205 8523 74 8654 205 7447 74 7447
Sex (% male) 0.7122 0.7490 NS 0.7568 0.7481 NS 0.7122 0.7602 NS 0.7568 0.7602 NS
Median age (range) 72 (29-89+) 70 (16-89+) 72 (19-89+) 70 16-89+) 72 (29-89+) 70 (16-89+) 72 (19-89+) 70 (16-89+)
Mean age 70.4657 69.3063 NS 69.4054 69.3328 NS 70.4657 69.6562 NS 69.4054 69.6562 NS
GA/tumor 8.0293 8.1165 NS 8.6622 8.1098 NS 8.0293 8.1151 NS 8.6622 8.1151 NS
Genomic ancestry
n 205 8523 74 8654 205 7447 74 7447
AFR 0 0.0635 2.53E-05 0 0.0625 NS 0 0 NS 0 0 NS
AMR 0 0.0541 1.66E-04 0 0.0533 NS 0 0 NS 0 0 NS
EAS 1 0 0 0 0.0237 NS 1 0 0 0 0 NS
EUR 0 0.8738 9.47E-177 0 0.8605 6.30E-62 0 1 0 0 1 1.26E-178
SAS 0 0.0087 NS 1 0 3.93E-183 0 0 NS 1 0 1.26E-178
Select pathogenic genomic alterations
ARID1A 0.1902 0.2477 NS 0.2838 0.2460 NS 0.1902 0.2558 NS 0.2838 0.2558 NS
BRCA1 0.0293 0.0201 NS 0.0405 0.0201 NS 0.0293 0.0195 NS 0.0405 0.0195 NS
BRCA2 0.0244 0.0307 NS 0.0270 0.0306 NS 0.0244 0.0308 NS 0.0270 0.0308 NS
CD274 0.0000 0.0095 NS 0.0000 0.0094 NS 0.0000 0.0089 NS 0.0000 0.0089 NS
CDKN2A 0.4146 0.3697 NS 0.3378 0.3710 NS 0.4146 0.3666 NS 0.3378 0.3666 NS
CDKN2B 0.3463 0.2944 NS 0.2703 0.2958 NS 0.3463 0.2917 NS 0.2703 0.2917 NS
ERBB2 0.1756 0.1678 NS 0.1216 0.1684 NS 0.1756 0.1685 NS 0.1216 0.1685 NS
FGFR3 0.1659 0.1843 NS 0.0946 0.1847 NS 0.1659 0.1837 NS 0.0946 0.1837 NS
MDM2 0.0829 0.0922 NS 0.0946 0.0920 NS 0.0829 0.0923 NS 0.0946 0.0923 NS
MTAP 0.2195 0.1835 NS 0.1622 0.1845 NS 0.2195 0.1805 NS 0.1622 0.1805 NS
PIK3CA 0.1268 0.2212 5.04E-03 0.1757 0.2193 NS 0.1268 0.2209 7.46E-03 0.1757 0.2209 NS
PTEN 0.0439 0.0456 NS 0.0135 0.0459 NS 0.0439 0.0457 NS 0.0135 0.0457 NS
RB1 0.1756 0.2127 NS 0.1892 0.2120 NS 0.1756 0.2130 NS 0.1892 0.2130 NS
TERT 0.5415 0.7292 2.31E-07 0.5811 0.7260 NS 0.5415 0.7360 6.34E-08 0.5811 0.7360 NS
TP53 0.5902 0.5980 NS 0.6757 0.5972 NS 0.5902 0.5978 NS 0.6757 0.5978 NS
TSC1 0.0976 0.0874 NS 0.0676 0.0878 NS 0.0976 0.0927 NS 0.0676 0.0927 NS
Microsatellite instability (MSI)
n 198 8231 71 8358 198 7175 71 7175
MSI-high 0.0152 0.0085 NS 0.0000 0.0087 NS 0.0152 0.0088 NS 0.0000 0.0088 NS
Tumor mutational burden (TMB)
n 205 8523 74 8654 205 7447 74 7447
TMB≥10 0.3073 0.3453 NS 0.3919 0.3440 NS 0.3073 0.3489 NS 0.3919 0.3489 NS
TMB≥20 0.0732 0.1235 NS 0.1216 0.1224 NS 0.0732 0.1258 NS 0.1216 0.1258 NS
Mutational signatures
n 95 3828 41 3882 95 3368 41 3368
Alkylating 0.0105 0.0010 NS 0.0000 0.0013 NS 0.0105 0.0012 NS 0.0000 0.0012 NS
APOBEC 0.6316 0.7194 NS 0.6829 0.7177 NS 0.6316 0.7301 NS 0.6829 0.7301 NS
MMR 0.0737 0.0387 NS 0.0244 0.0397 NS 0.0737 0.0377 NS 0.0244 0.0377 NS
POLE 0.0000 0.0010 NS 0.0000 0.0010 NS 0.0000 0.0009 NS 0.0000 0.0009 NS
Tobacco 0.0000 0.0052 NS 0.0000 0.0052 NS 0.0000 0.0045 NS 0.0000 0.0045 NS
UV 0.0000 0.0146 NS 0.0000 0.0144 NS 0.0000 0.0157 NS 0.0000 0.0157 NS
PD-L1 IHC
n 3 200 2 201 3 166 2 166
PD-L1 neg 0.3333 0.6050 NS 0.5000 0.6020 NS 0.3333 0.6084 NS 0.5000 0.6084 NS
PD-L1 low 0.0000 0.2300 NS 0.5000 0.2239 NS 0.0000 0.2229 NS 0.5000 0.2229 NS
PD-L1 high 0.6667 0.1650 NS 0.0000 0.1741 NS 0.6667 0.1687 NS 0.0000 0.1687 NS

Comparisons between EAS vs. non-EAS, SAS vs. non-EAS, EAS vs. EUR, and SAS vs. EUR are shown.

False discovery rate (FDR) corrected using the Benjamini-Hochberg procedure.

Abbreviation: NS, not significant; SAS, South Asian; EAS, East Asian; GA, genomic alteration; EUR, European genomic ancestry; AFR, African genomic ancestry; AMR, Admixed-American genomic ancestry.