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. 2023 Oct 4;22:295. doi: 10.1186/s12936-023-04729-6

Table 1.

Characterization of the INDEL variants included in the panel

Genes ID Region Alleles MAF Primers Amplicon size
FAS rs10532972 Intron TTC/- 0.12

F5’GCATCAGGACGCTGAACATA3’

R5’AATGCAACTTGCTCCAGAGG3’

368–371
FADD rs4197 3’-UTR -/TGT 0.47

F 5’TGCCCCTACTTAGCAGTCTCA3’

R 5’GAGAGGTGGAGAACTGGGATT3’

278–281
CASP8 rs3834129 Promoter AGTAAG/- 0.39

F 5’CTCTTCAATGCTTCCTTGAGGT3’

R 5’CTGCATGCCAGGAGCTAAGTAT3’

249–255
CASP8 rs59308963 Intron ATTCTGTC/- 0.26

F 5’TTTTTGTCCTCCAAGCTTCC3’

R 5’GAACAAGAGAGAGGGCAGGA3’

261–269
CASP9 rs61079693 Intron AAAA/- 0.32

F 5’CATGCACAGCTATCCAGGAG3’

R 5’TTGTTCCTGTCCGATAGATGC3’

458–462
CASP3 rs4647655 Intron -/AAATCCTGAA 0.28

F 5’AGGAGTATCCCCTCGTGGAC3’

R 5’CAAGAGTCAGGCAAAAACAGG3’

379–389
BCL-2 rs11269260 Intron TCTATCACCGATCATT/- 0.37

F 5’GCTTCCAGTTCCATCCATGT3’

R 5’CTCAGCGTGGTAGTGTTGGA3’

189–205
TP53 rs17880560 3’-Flanking -/GCCGTG 0.21

F 5’CTGTGTGTCTGAGGGGTGAA3’

R 5’ATCCTGCCACTTTCTGATGG3’

400–406