Table 1.
Fold change of differentially expressed lncRNAs and their putative Cis-regulated genes.
| LncRNA ID | Fold change | Chromosome | Target gene | Protein ID | |
|---|---|---|---|---|---|
| up | MSTRG.15884.4 | 2.133 | NW_024121599.1 | tspan9a | XP_039506408.1 |
| up | MSTRG.7520.1 | 1.732 | NW_024121210.1 | LOC120482205 | XP_039532215.1 |
| up | MSTRG.7520.1 | 1.732 | NW_024121210.1 | tpst2 | XP_039533351.1 |
| up | MSTRG.7038.4 | 2.511 | NW_024121210.1 | LOC120483115 | XP_039533940.1 |
| up | MSTRG.9784.1 | 1.886 | NW_024121277.1 | tuba8l3 | XP_039539361.1 |
| up | MSTRG.9784.1 | 1.886 | NW_024121277.1 | LOC120487337 | XP_039539583.1 |
| up | MSTRG.9784.1 | 1.886 | NW_024121277.1 | mnx2a | XP_039539115.1 |
| up | MSTRG.9784.1 | 1.886 | NW_024121277.1 | cfap65 | XP_039539066.1 |
| up | MSTRG.20768.1 | 1.98 | NW_024121988.1 | LOC120473120 | XP_039518730.1 |
| up | MSTRG.20768.1 | 1.98 | NW_024121988.1 | dhps | XP_039518698.1 |
| up | MSTRG.2630.7 | 1.829 | NW_024121122.1 | sdk2b | XP_039521372.1 |
| down | MSTRG.2177.1 | −4.288 | NW_024121118.1 | srpk2 | XP_039520092.1 |
| down | MSTRG.2177.1 | −4.288 | NW_024121118.1 | zgc:114188 | - |
| down | MSTRG.314.2 | −1.697 | NW_024121099.1 | crim1 | XP_039523088.1 |
| down | MSTRG.314.2 | −1.697 | NW_024121099.1 | slc24a4a | XP_039523115.1 |
| down | MSTRG.11174.1 | −2.252 | NW_024121321.1 | psmd11a | XP_039543386.1 |
| down | MSTRG.11174.1 | −2.252 | NW_024121321.1 | cdk5r1a | XP_039543717.1 |
| down | MSTRG.1726.1 | −4.317 | NW_024121108.1 | irx1a | XP_039511053.1 |
| down | MSTRG.4740.3 | −4.695 | NW_024121164.1 | LOC120478387 | XP_039526179.1 |
| down | MSTRG.19090.1 | −2.082 | NW_024121876.1 | abhd17b | XP_039515241.1 |
| down | MSTRG.19090.1 | −2.082 | NW_024121876.1 | cunh9orf85 | XP_039515242.1 |
| down | MSTRG.19090.1 | −2.082 | NW_024121876.1 | gda | XP_039515753.1 |
| down | MSTRG.6434.1 | −3.273 | NW_024121199.1 | stc1 | XP_039530706.1 |
| down | MSTRG.1774.1 | −4.58 | NW_024121110.1 | tafa5a | XP_039511327.1 |
| down | MSTRG.16161.2 | −2.703 | NW_024121621.1 | asb2b | XP_039507017.1 |
| down | MSTRG.16161.2 | −2.703 | NW_024121621.1 | LOC120462465 | XP_039507048.1 |
| down | MSTRG.16161.2 | −2.703 | NW_024121621.1 | exd1 | XP_039507036.1 |
| down | MSTRG.8242.1 | −2.426 | NW_024121222.1 | LOC120484488 | XP_039535603.1 |
| down | MSTRG.8242.1 | −2.426 | NW_024121222.1 | LOC120484618 | XP_039535833.1 |
| down | MSTRG.8242.1 | −2.426 | NW_024121222.1 | syt11b | XP_039535493.1 |