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Comparison of some features between MegaLTR and EDTA.
| Identified TEs | Classification level | Identify LTR-RT | Availability | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| DNA TEs | LTR-RTs | Autonomous and non-autonomous | Superfamily | Lineage level | Gene chimeras | Near genes | Web server | Standalone | ||
| MegaLTR | X | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | |
| EDTA | ✓ | ✓ | X | ✓ | X | X | X | X | ✓ | |
| LTR-RTs sub-classification level | ||||||||||
| Copia | Gypsy | Unknown | LARD | TRIM | TR-GAG | BARE-2 | ||||
| MegaLTR | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | |||
| EDTA | ✓ | ✓ | ✓ | X | X | X | X | |||
"✓" refer to the feature is found, and "X" refers to the feature is missing.
