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. 2023 Aug 20;9(9):e19341. doi: 10.1016/j.heliyon.2023.e19341

Table 1.

Interaction of G-CK with amino acid residues of ACE2 (6M0J).

Protein Compound Binding Energy (kcal/mol) H-Bond Interactions Other Interactions No. of H-Bond
ACE2 G-CK −8.0 ASP350, ASP382, TYR385, ASN394, ARG393, HIS401 TRP349 6
Dexamethasone −7.8 SER47, ASP382, TYR385, HIS401 4
Indinavir −9.0 ALA348, ASP350, TYR385 THR347, TRP349, ASP382, ARG393, HIS401 3
Remdesivir −8.1 ASP206, LYS562 LEU95, TRP203, VAL209, PRO565 2
Camostat −7.4 SER43, ASP350, ASP382, TYR385, ASN394, HIS401 SER47, MET62, TRP349 6
Chloroquine −6.5 TYR196 TYR202, GLY205, GLU208, GLU564 1
NAG −6.2 ASP350, ASP382, TYR385, ARG393, HIS401 PHE40, ALA348 5

From the point of view of binding energy, as well as having almost similar H-bond and other types of interaction to the controls at the allosteric site of ACE2, G-CK shows strong interactions with the main host-based target ACE2 of the new coronavirus, showing G-CK might be a promising ACE2 inhibitor (Fig. 1). Hence, the G-CK and Dexamethasone in complex with ACE2 has been further utilized for molecular dynamics simulation to validate the docking scores and other properties.