TABLE 2.
Synthetic oligonucleotide primers
Primer | Nucleotide sequence | Coordinatesa |
---|---|---|
94 | 5′-GAAAATGTCAAGGACTT-3′ | 72–88 |
211 | 5′-CGTTCCTTGTCCTGCT-3′ | 5542–5527 |
212 | 5′-TCGGGGACTATTACTA-3′ | 2173–2188 |
220 | 5′-CATCAATCACAATCTC-3′ | 5025–5010 |
221 | 5′-TGGTGCGGTAGAGTGG-3′ | 4131–4116 |
274 | 5′-AACCTGTGGTTATGTAT-3′ | 3407–3391 |
300 | 5′-GGGCTATACTTTAATAG-3′ | 1–17 |
1727 | 5′-GGGGTCGAGTTTGTCAAG-3′ | 6338–6321 |
3277b | 5′-AGTATTCCGCAAAGGTTTTTCTTCTGCGG-3′ | 2220–2200 |
4675 | 5′-AATCAAGCAGGACAAGGAACGA-3′ | 5522–5543 |
4676 | 5′-TGAAGTCCTTGACATTTTCTTA-3′ | 86–75 |
All primers were derived from Tn4451, the nucleotide sequence of which was published previously (5).
Note that the first 8 nucleotide bases at the 3′ end of this oligonucleotide primer are not derived from Tn4451.