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. 2023 Oct 11;24:605. doi: 10.1186/s12864-023-09710-w

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 2 — Manhattan plots of cis-eQTL mapping results. a cis-eQTLs identified in PB samples within 1 Mb upstream of a TSS. b cis-eQTLs identified in ICV samples within 1 Mb upstream of a TSS. The plot shows in the Y axis the –log₁₀ (P_β-values) of each SNP and in the X axis the chromosome where each cis-eQTL is located. Each dot represents a SNP along the Bos taurus genome. The dotted lines represent the P_β-values that correspond to a FDR equal to 0.05. c, d The chart shows the genomic distributions of the PB (c) and ICV (d) cis-eQTLs identified within 1 Mb upstream of a TSS according to the Ensembl Variant Effector Predictor (VEP)