Table 1.
Locations of the CODIS loci
| Marker | Chr | Start position (approximate MB, hg19) | Distance to nearest protein-coding gene (0 = intragenic) | Protein-coding genes w/in 100kb, in proximity order | Common SNPs in Hapmap CEU w/in 10kb |
|---|---|---|---|---|---|
| D1S1656 | 1 | 230.9 | 0 | CAPN9, AGT, C1orf198, COG2 | 58 |
| TPOX | 2 | 1.5 | 0 | TPO | 22 |
| D2S441 | 2 | 68.2 | 29,159 | C1D | 22 |
| D2S1338 | 2 | 218.9 | 11,910 | TNS1, RUFY4 | 11 |
| D3S1358 | 3 | 45.6 | 0 | LARS2, LIMD1 | 7 |
| FGA | 4 | 155.5 | 0 | FGA, FGB, FGG, PLRG1, DCHS2 | 16 |
| D5S818 | 5 | 123.1 | 158,529 | 24 | |
| CSF1PO | 5 | 149.5 | 0 | CSF1R, HMGXB3, PDGFRB, TIGD6, SLC26A2, CDX1 | 36 |
| D7S820 | 7 | 83.8 | 0 | SEMA3A | 19 |
| D8S1179 | 8 | 125.9 | 78,404 | ZNF572 | 19 |
| D10S1248 | 10 | 131.1 | 172,971 | 39 | |
| TH01 | 11 | 2.2 | 0 | TH, INS, IGF2, ASCL2 | 21 |
| vWA | 12 | 6.1 | 0 | VWF, ANO2 | 33 |
| D12S391 | 12 | 12.5 | 28,998 | MANSC1, LRP6, BORCS5 | 32 |
| D13S317 | 13 | 82.7 | 1,729,158 | 21 | |
| D16S539 | 16 | 86.4 | 157,803 | 59 | |
| D18S51 | 18 | 60.9 | 0 | BCL2, KDSR | 25 |
| D19S433 | 19 | 30.4 | 15,972 | URI1 | 22 |
| D21S11 | 21 | 20.6 | 778,252 | 22 | |
| D22S1045 | 22 | 37.5 | 0 | IL2RB, TMPRSS6, C1QTNF6, SSTR3, KCTD17, RAC2 | 38 |