Table 1.
Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) analysis of the gene expression in human coronary artery endothelial cells (HCAECs) and human internal thoracic artery endothelial cells (HITAECs) cultured at laminar flow or in static conditions. Expression has been normalised for the expression of three housekeeping genes (GAPDH, ACTB, and B2M).
Gene | Flow Culture Chambers (µ-Slide y-Shaped) |
Static Conditions Experiment #1 |
Static Conditions Experiment #2 |
Static Conditions Experiment #3 |
Static Conditions Experiment #4 |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HCAECs, ΔCt (Mean ± Standard Deviation) |
HITAECs, ΔCt (Mean ± Standard Deviation) |
Fold Change (HCAECs to HITAECs) |
HCAECs, ΔCt (Mean ± Standard Deviation) |
HITAECs, ΔCt (Mean ± Standard Deviation) |
Fold Change (HCAECs to HITAECs) |
HCAECs, ΔCt (Mean ± Standard Deviation) |
HITAECs, ΔCt (Mean ± Standard Deviation) |
Fold Change (HCAECs to HITAECs) |
HCAECs, ΔCt (Mean ± Standard Deviation) |
HITAECs, ΔCt (Mean ± Standard Deviation) |
Fold Change (HCAECs to HITAECs) |
HCAECs, ΔCt (Mean ± Standard Deviation) |
HITAECs, ΔCt (Mean ± Standard Deviation) |
Fold Change (HCAECs to HITAECs) |
|
VCAM1 | 0.0051 ± 0.0004 | 0.0053 ± 0.0006 | 0.962 | 0.0015 ± 0.0004 | 0.0098 ± 0.0009 | 0.153 | N/D | N/D | N/D | 0.0013 ± 0.0002 | 0.0955 ± 0.0039 | 0.014 | 0.0051 ± 0.0002 | 0.0455 ± 0.0041 | 0.112 |
ICAM1 | 0.0331 ± 0.0021 | 0.1659 ± 0.0121 | 0.200 | 0.0050 ± 0.0003 | 0.0407 ± 0.0027 | 0.123 | 0.0279 ± 0.0132 | 0.0559 ± 0.0231 | 0.499 | 0.0163 ± 0.0079 | 2.0781 ± 0.7478 | 0.008 | 0.0313 ± 0.0096 | 0.2675 ± 0.1376 | 0.117 |
SELE | 0.0012 ± 0.0001 | 0.0265 ± 0.0067 | 0.045 | 0.0011 ± 0.0002 | 0.0481 ± 0.0039 | 0.023 | 0.0002 ± 0.00002 | 0.0219 ± 0.0016 | 0.009 | 0.0004 ± 0.0001 | 0.0942 ± 0.0110 | 0.004 | 0.0029 ± 0.0002 | 0.0939 ± 0.0057 | 0.031 |
SELP | 0.0010 ± 0.0001 | 0.0184 ± 0.0028 | 0.054 | 0.0025 ± 0.0009 | 0.0044 ± 0.0011 | 0.568 | 0.0899 ± 0.0035 | 0.0080 ± 0.0037 | 11.238 | 0.0127 ± 0.0016 | 0.0555 ± 0.0099 | 0.229 | 0.0321 ± 0.0022 | 0.0203 ± 0.0011 | 1.581 |
IL6 | 0.0044 ± 0.0004 | 0.0199 ± 0.0016 | 0.221 | 0.0029 ± 0.0007 | 0.0007 ± 0.0003 | 4.143 | 0.0042 ± 0.0003 | 0.0211 ± 0.0019 | 0.199 | 0.0029 ± 0.0002 | 0.0095 ± 0.0020 | 0.305 | 0.0084 ± 0.0009 | 0.0050 ± 0.0003 | 1.680 |
CXCL8 | 0.0337 ± 0.0009 | 0.1774 ± 0.0129 | 0.190 | 0.0701 ± 0.0045 | 0.0557 ± 0.0051 | 1.259 | 0.0256 ± 0.0029 | 0.3286 ± 0.0285 | 0.078 | 0.0301 ± 0.0028 | 0.5886 ± 0.0732 | 0.051 | 0.1107 ± 0.0063 | 0.4469 ± 0.0335 | 0.248 |
CCL2 | 0.0112 ± 0.0009 | 0.2993 ± 0.0247 | 0.037 | 0.0279 ± 0.0091 | 0.2563 ± 0.0137 | 0.109 | 0.0614 ± 0.0038 | 1.0850 ± 0.1059 | 0.057 | 0.0543 ± 0.0026 | 4.3406 ± 0.9546 | 0.013 | 0.0920 ± 0.0048 | 0.9923 ± 0.0732 | 0.093 |
CXCL1 | N/D | N/D | N/D | 0.0763 ± 0.0080 | 0.0651 ± 0.0061 | 1.172 | 0.0984 ± 0.0274 | 0.2571 ± 0.0556 | 0.383 | 0.1074 ± 0.0154 | 1.6440 ± 0.4153 | 0.065 | 0.2617 ± 0.0185 | 0.2715 ± 0.0439 | 0.964 |
MIF | N/D | N/D | N/D | 0.2152 ± 0.0231 | 0.0812 ± 0.0074 | 2.650 | 0.4353 ± 0.0956 | 2.6439 ± 0.1977 | 0.165 | 0.1903 ± 0.0117 | 4.0451 ± 0.5167 | 0.047 | 0.4234 ± 0.0139 | 0.6183 ± 0.0129 | 0.685 |
KLF2 | 0.0047 ± 0.0006 | 0.0021 ± 0.0002 | 2.238 | 0.0018 ± 0.0009 | 0.0004 ± 0.0001 | 4.500 | N/D | N/D | N/D | N/D | N/D | N/D | N/D | N/D | N/D |
KLF4 | 0.0239 ± 0.0012 | 0.1268 ± 0.0178 | 0.188 | 0.0010 ± 0.0002 | 0.0005 ± 0.0001 | 2.000 | N/D | N/D | N/D | N/D | N/D | N/D | N/D | N/D | N/D |
NFE2L2 | 0.0618 ± 0.0041 | 0.0293 ± 0.0010 | 2.109 | 0.0866 ± 0.088 | 0.0523 ± 0.0026 | 1.656 | N/D | N/D | N/D | N/D | N/D | N/D | N/D | N/D | N/D |
SNAI1 | 0.0312 ± 0.0011 | 0.3193 ± 0.0632 | 0.098 | 0.0071 ± 0.0004 | 0.0121 ± 0.0017 | 0.587 | 0.0286 ± 0.0031 | 0.0381 ± 0.0065 | 0.751 | 0.0011 ± 0.0001 | 0.1209 ± 0.0140 | 0.009 | 0.0236 ± 0.0011 | 0.0237 ± 0.0031 | 0.996 |
SNAI2 | 0.0003 ± 0.00002 | 0.0002 ± 0.00004 | 1.500 | 0.0002 ± 0.00001 | 0.0001 ± 0.00001 | 2.000 | 0.0371 ± 0.0045 | 0.0025 ± 0.0007 | 14.840 | 0.00006 ± 0.00002 | 0.0043 ± 0.0015 | 0.014 | 0.0034 ± 0.0002 | 0.0001 ± 0.00005 | 34.000 |
TWIST1 | 0.0005 ± 0.0001 | 0.0001 ± 0.00001 | 5.000 | 0.0004 ± 0.00001 | 0.00001 ± 0.00001 | 40.000 | 0.0010 ± 0.0004 | 0.0007 ± 0.0002 | 1.429 | 0.00008 ± 0.00002 | 0.00014 ± 0.0001 | 0.571 | 0.0002 ± 0.00004 | 0.00004 ± 0.00002 | 5.000 |
ZEB1 | 0.0845 ± 0.0096 | 0.0886 ± 0.0056 | 0.954 | 0.0350 ± 0.0057 | 0.0343 ± 0.0034 | 1.020 | 0.0818 ± 0.0037 | 0.1628 ± 0.0196 | 0.502 | 0.0068 ± 0.0004 | 0.0655 ± 0.0094 | 0.104 | 0.0486 ± 0.0024 | 0.0552 ± 0.0083 | 0.880 |
CDH5 | 0.6792 ± 0.0132 | 3.0981 ± 0.3207 | 0.219 | 0.4247 ± 0.0985 | 0.5115 ± 0.0189 | 0.830 | 0.3888 ± 0.0087 | 0.3852 ± 0.0165 | 1.009 | 0.9632 ± 0.0871 | 9.4160 ± 2.8673 | 0.102 | 1.1429 ± 0.1359 | 2.1643 ± 0.0577 | 0.528 |
CDH2 | 0.0088 ± 0.0013 | 0.0103 ± 0.0015 | 0.854 | 0.0108 ± 0.0015 | 0.0028 ± 0.0009 | 3.857 | 0.0670 ± 0.0056 | 0.0001 ± 0.0002 | 670.000 | 0.0479 ± 0.0032 | 0.0146 ± 0.0039 | 3.281 | 0.1393 ± 0.0119 | 0.0079 ± 0.0003 | 17.633 |
NOS3 | 0.0450 ± 0.0008 | 0.1536 ± 0.0102 | 0.293 | 0.0066 ± 0.00011 | 0.0020 ± 0.0007 | 3.300 | 0.0015 ± 0.0004 | 0.0009 ± 0.0007 | 1.667 | 0.0057 ± 0.0005 | 0.2375 ± 0.0387 | 0.024 | 0.0262 ± 0.0026 | 0.0125 ± 0.0003 | 2.096 |
N/D—not defined (have not been measured).