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. 2023 Oct 13;11:1579. Originally published 2022 Dec 23. [Version 3] doi: 10.12688/f1000research.126839.3

Table 2. Refining approximate tblastn coordinates for coding exons of Rheb in D. yakuba (DyakCAF1).

Comparison between the tblastn and refined coordinates for the model of Rheb in D. yakuba. Note that in most cases, the coordinates identified by the tblastn search are adjusted by a few nucleotides (difference columns) via visual curation to account for incomplete codons and over-extensions of the tblastn alignment.

Exon Number Approximate coordinates from tblastn search Refined exon coordinates Difference (refined - tblastn)
Start Stop Start Stop Start Stop
1 17,358,666 17,358,713 17,358,666 17,358,714 0 1
2 17,358,844 17,358,912 17,358,842 17,358,913 -2 1
3 17,359,013 17,359,216 17,359,011 17,359,218 -2 2
4 17,359,279 17,359,407 17,359,278 17,359,407 -1 0
5 17,359,470 17,359,559 17,359,470 17,359,559 0 0