Fig. 3.

Pairwise TMRCA and allele age prediction on sequencing data. (a) True pairwise TMRCAs (x axis) versus those estimated by CoalNN and ASMC (y axis) under a European demographic model for one simulation. For TMRCA prediction performance of CoalNN and ASMC by decile of the true TMRCA distribution, see supplementary table 3, Supplementary Material online. (b) True nonsingleton variant ages (x axis) versus those estimated by CoalNN, Relate, and tsdate+tsinfer (y axis) under a constant diploid population size $N_e=\mathrm{10,000}$.