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. 2023 Oct 17;16:367. doi: 10.1186/s13071-023-05923-w

Table 1.

Statistical summary of the de novo assembled Haemaphysalis flava transcriptome

Statistical parameters Values
Contig information
 Total number of contigs 1,083,053
 Number of bases 478,226,128
 Mean length of contigs (bp) 442
 N50 length of contigs (bp) 470
 GC% of contigs 49.28
 Largest contig (bp) 8332
 No. of large contigs ≥ 500 bp 287,811
 No. of large contigs ≥ 1000 bp 42,711
Transcript information
 Total number of sequences 295,010
 Number of bases 165,143,182
 Mean length of sequences (bp) 560
 N50 length of sequences (bp) 644
 GC % of sequences 49.92
 Largest sequence (bp) 8332
 No. of large sequences ≥ 500 bp 127,327
 No. of large sequences ≥ 1000 bp 28,528
unigene information
 Total number of unigenes 69,822
 Number of bases 55,278,029
 Mean length of unigenes (bp) 792
 N50 length of unigenes (bp) 947
 GC% of unigenes 53.09
 Length range of unigenes (bp) 77–13,587

GC% guanine-cytosine content (%), N50 length length for which the collection of all contigs of that length or longer contains at least half of the sum of the lengths of all contigs