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. 2023 Oct 18;19(10):e1011530. doi: 10.1371/journal.pcbi.1011530

Fig 5. A wide range of features are available for Catalyst model analysis.

Fig 5

A CRN model can be created either through the DSL, by manually declaring the reaction events, or by loading it from a file. The model is stored in the ReactionSystem IR, which can be used as input to a wide range of methods. Purple boxes indicate code written by the user, and green boxes the corresponding output. For some methods, either one, or both, boxes are omitted.