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. 2023 Oct 18;19(10):e1011530. doi: 10.1371/journal.pcbi.1011530

Table 2. Final (physical) time for model steady states in ODE benchmarks.

Model: Multistate Multisite2 Egfr_net BCR Fceri_gamma2
20 s 2 s 10 s 20,000 s 150 s

For each model, we determined the time at which it had (approximately) reached a steady state. These times were used for the ODE benchmarks in Fig 3 and Fig A in S1 Text. Unlike the other models, BCR exhibits a limit cycle. Here, rather than simulating until an (approximate) steady state had been reached, we simulated it for 20,000 time units (permitting it to complete 3 pulse events, Fig G in S1 Text).