Extended Data Fig. 7. Additional examples of human related proteins in structural clusters with representatives or partial matches in bacterial species.
(a) We found bacterial structures related to the human CD4 like protein B4E1T0. The human protein (B4E1T0) has 3 Pfams - PF05790, PF09191, PF12104. Those Pfams are specific to Eukaryotes only. In contrast, the bacterial protein (A0A1F4ZDN5) has no Pfam annotation. (b) The human protein (B4DKH6) is a bactericidal permeability-increasing protein found in humans. The E. coli protein (P0AB26) has a similar structure to the human protein, contains a Pfam domain of unknown function (DUF) and its structure is also experimentally determined (PDB: 3l6i B).