Table 3.
Variables selected for each comparison and performance assessment of the classifier.
Comparison | Retained variables | Coefficient | Cutpoint | AUC | Sensitivity | Specificity | PPV | NPV |
---|---|---|---|---|---|---|---|---|
SCLC vs CTR | Batch | 0.634 | 0.4166 | 0.574 | 0.3125 | 0.8824 | 0.7143 | 0.576 |
Age | 0.3153 | |||||||
PLASMA.miR.122.5p.vs.93.5p | -0.01554 | |||||||
PLASMA.miR.320b.vs.93.5p | -0.003632 | |||||||
PLASMA.miR.375.3p.vs.126.3p | 2.573 | |||||||
SCLC vs ADENO | Batch | 1.091 | 0.5771 | 0.75 | 0.375 | 1 | 1 | 0.411 |
PLASMA.miR.375.3p.vs.24.3p | 0.5744 | |||||||
SCLC vs SCC | Batch | 1.013 | 0.5494 | 0.833 | 0.375 | 1 | 1 | 0.375 |
PLASMA.miR.375.3p.vs.126.3p | 1.507 | |||||||
SCLC vs NSCLC | Batch | 0.9479 | 0.4012 | 0.793 | 0.375 | 1 | 1 | 0.565 |
PLASMA.miR.375.3p.vs.24.3p | 0.3593 | |||||||
SCLC vs OTHER | Batch | 0.9766 | 0.4423 | 0.658 | 0.3125 | 1 | 1 | 0.731 |
PLASMA.miR.144.3p.vs.24.3p | 0.003482 | |||||||
PLASMA.miR.375.3p.vs.126.3p | 1.206 | |||||||
SCLC stage I+II vs CTR | Batch | 2.17 | 0.2394 | 0.515 | 0.5 | 0.5294 | 0.2 | 0.818 |
PLASMA.miR.375.3p.vs.126.3p | -4.265 | |||||||
SCLC stage I+II+III vs CTR | Batch | 0.5922 | 0.3019 | 0.444 | 0.4444 | 0.4118 | 0.2857 | 0.583 |
PLASMA.miR.375.3p.vs.126.3p | 1.239 | |||||||
SCLC stage IV vs CTR | Batch | -0.1454 | 0.3414 | 0.882 | 0.2857 | 0.9412 | 0.6667 | 0.761 |
Age | 0.4699 | |||||||
Race | -0.6286 | |||||||
PLASMA.miR.144.3p.vs.24.3p | 0.01695 | |||||||
PLASMA.miR.320b.vs.126.3p | -3.508 | |||||||
PLASMA.miR.375.3p.vs.126.3p | 6.354 |
AUC, area under the ROC curve; PPV, positive predicted value; NPV, negative predicted value.