Table 3.
The LD (r2) structure between e SNP-marker pair located on the same chromosome.
| Chro. | r2 | No. sig. LD | Average Sig. LD | No. of non-sig. LD | Average non-sig. LD |
|---|---|---|---|---|---|
| 1 H | 0.025965 | 55,949 | 0.280547 | 2208,615 | 0.0195156 |
| 2 H | 0.026534 | 107,148 | 0.266738 | 5223,133 | 0.0216067 |
| 3 H | 0.034789 | 6,7277 | 0.2787828 | 1721,590 | 0.0252542 |
| 4 H | 0.025813 | 8,0271 | 0.26629 | 4059,505 | 0.0210577 |
| 5 H | 0.02621 | 87241 | 0.2837086 | 4822,135 | 0.0215513 |
| 6 H | 0.023678 | 16,7096 | 0.2762896 | 12,975,253 | 0.0204249 |