TABLE 1.
Short-read data (MiSeq, Illumina) |
Long-read data (Sequel II, PacBio) |
|
---|---|---|
Total reads | 2.8 million | 14.1 thousand |
Average read length | 224 bp | 3,675 bp |
Genome coverage distribution for reference-based assembly | 151,379 bp | 152,159 bp |
Average sequencing depth across genome | 485× | 12× |
Genome coverage distribution with de novo assembly | 134,520 bp | 136,968 bp |
Number of contigs for de novo assembly | 11 | 9 |
N50 for de novo assembly | 44,644 bp | 45,163 bp |