Table 2.
Metrics of the genome annotation
Total_# of genes | 18,225 |
Single_exon genes | 1275 (7.0%) |
Multi_exon genes | 16,950 (93.0%) |
Genes mapping_to_Pfam | 16,495 (90.5%) |
Genes mapping_to_RefSeq/SwissProt | 17,580 (96.5%) |
Genes with_RNA_support | 15,411 (84.6%) |
Genes without_start_codon | 1090 (6.0%) |
Pseudogenes_with_RNA | 732 (4.0%) |
Pseudogenes_without_RNA | 520 (2.9%) |
BUSCO analysis using the vertebrata_odb9 gene set (n = 2586) | |
Before annotation | C:89.3% [S:86.8%, D:2.5%], F:4.4%, M:6.3% |
After annotation | C:96.0% [S:92.0%, D:4.0%], F:2.2%, M:1.8% |
C complete, S single, D duplicate, F fragmented, M missing.