Fig. 1.

Overview of experimental design. Each tumor was profiled in five different ways, three times with bulk RNA-seq (blue box) and twice with scRNA-seq (red box) using two strategies for mRNA enrichment, rRNA depletion (green text) and poly-A capture (purple text). Gold text represent analyses that performed prior to deconvolution, with gold arrows signifying the datasets that compared in that analysis. Note that every data type will be used for the comparison of deconvolution methods