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. 2023 Oct 20;18(10):e0293015. doi: 10.1371/journal.pone.0293015

Fig 5. Sequence similarity analysis of YhjE-like transporters and gene neighborhoods containing its homologues.

Fig 5

(A) Sequence similarity network using an alignment score of 110. Sequences for the network were collected by searching against UniRef50 (500 hits) with YhjE and mapping to UniRef90 for network construction. Experimentally characterized proteins or proteins with predicted functions (in italics) based on bioinformatic analyses are labeled. The taxonomic classification of each node is colored according to the key shown on top left. (B) iqTREE using edited MAFFT alignment based on UniRef50 sequences, and (C) examples of gene neighborhoods containing a YhjE-like MFS transporter with the key defining them located at the bottom right.