Table 2.
Sample-specific network construction methods. These tools use patient-specific data to build patient-specific correlation networks between genes.
Software | Data Type | Measure of Association | Year | Ref. |
---|---|---|---|---|
Single-Sample Network (SSN) | Paired-Tumour/Normal | Linear | 2016 | Liu et al. [50] |
Linear Interpolation to Obtain Network Estimates for Single Samples (LIONESS) | Tumour Only | Unspecified | 2019 | Kuijjer et al. [51] |
Cell-Specific Network Construction (CSN) | Tumour Only | Linear and Nonlinear | 2019 | Dai et al. [52] |