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. 2023 Oct 13;21:5028–5038. doi: 10.1016/j.csbj.2023.10.019

Table 2.

Sample-specific network construction methods. These tools use patient-specific data to build patient-specific correlation networks between genes.

Software Data Type Measure of Association Year Ref.
Single-Sample Network (SSN) Paired-Tumour/Normal Linear 2016 Liu et al. [50]
Linear Interpolation to Obtain Network Estimates for Single Samples (LIONESS) Tumour Only Unspecified 2019 Kuijjer et al. [51]
Cell-Specific Network Construction (CSN) Tumour Only Linear and Nonlinear 2019 Dai et al. [52]