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. 2023 Oct 20;24:241. doi: 10.1186/s13059-023-03078-6

Fig. 6.

Fig. 6

Mouse olfactory bulb. A laminar structures of Allen reference atlas with functional layers were annotated and H&E staining of 10X Visium and Stereo-seq data, this experiment aimed to integrate Stereo-seq data and Slide-seq V2 data, whose model were used to predict 10X Visium data. B Boxplot of iLISI-CoM of eight methods in integrating mouse olfactory bulb datasets of Stereo-seq and Slide V2-seq. C Joint clustering (Louvain) for integrated Stereo-seq and Slide V2-seq datasets by SPIRAL. D Violin plot of domain-marker gene expressions in derived clusters by SPIRAL