Table 2.
Sequencing analysis of pancreatic cancers using EUS-FNA/FNB
| Year | References | Patientnumber | Cancertype | Samplingmethods | Analysismethods | Analysistarget | Success rate ofsequencing analysis | Detection rate ofactionable mutations |
|---|---|---|---|---|---|---|---|---|
| 2013 | Young et al. [41] | 23 |
PDCA (18) Others (5) |
FNA | Targeted seq | 287 genes | 100% | ND |
| 2016 | Valero et al. [55] | 17 | ND | FNA | Targeted seq with MB | 409 genes | 89.5% | 23.5% |
| 2016 | Rodriguez et al. [56] | 23 |
PDAC (15) Others (8) |
FNA | RNA seq | 85 genes | 71.9% | ND |
| 2016 | Kameta et al. [35] | 38 |
PDAC (27) Others (11) |
FNA | Targeted seq | 50 genes | 100% | ND |
| 2016 | Gleeson et al. [41] | 47 | ND | FNA | Targeted seq | 160 genes | 61.7% | 0% |
| 2017 | Lowery et al. [54] | 52 | PDAC (52) | FNA/FNB | Targeted seq | 410 genes | ND | ND |
| 2018 | Larson et al. [48] | 61 | ND | FNA/FNB | Targeted seq | ND | 67.2% | ND |
| 2019 | Elhanafi et al. [37] | 167 | ND | FNA/FNB | Targeted seq | 47 genes | 70.1% | ND |
| 2019 | Dreyer et al. [36] | 41 |
PDAC (36) Others (5) |
FNB | WGS | ND | 72% | 16% |
| 2020 | Ishizawa et al. [52] | 26 | PDAC (26) | FNA | Targeted seq | 409 genes | 100% | ND |
| 2020 | Park et al. [53] | 190 | PDAC (190) | FNA/FNB | Targeted seq | 83 genes | 57.4% | ND |
| 2021 | Kandel et al. [49] | 50 |
PDAC (37) Others (13) |
FNA/FNB | Targeted seq | ND | 92% | ND |
| 2021 | Takano et al. [57] | 58 | PDAC (58) | FNA/FNB | Targeted seq with MB | 50 genes | 94.8% | 22.4% |
| 2021 | Habib et al. [58] | 59 |
PDAC (56) Others (3) |
FNA | Targeted seq | 9 genes | ND | ND |
| 2021 | Semaan et al. [59] | 23 | PDAC (23) | FNA | EpCAM-pulldown combinedwith MB WES | ND | 100% | 21.7% |
| 2021 | Carrara et al. [60] | 33 | PDAC (33) | FNB | Targeted seq | 21 genes | 97% | ND |
| 2021 | Kondo et al. [51] | 22 | ND | FNA | Targeted seq | 324 genes | 68.2% | ND |
| 2022 | Gan [50] | 26 | PDAC (26) | FNA/FNB | Targeted seq | ND | 42–81% | ND |
| 2022 | Hisada et al. [61] | 33 |
PDAC (31) Others (2) |
FNB | Targeted seq | 124 genes | 57.1% | 33.3% |
| 2023 | Ikeda et al. [62] | 30 | PDAC (30) | FNA/FNB | Targeted seq | 124 genes | 100% | ND |
ND not described, EUS endoscopic ultrasound, FNA fine-needle aspiration, FNB fine-needle biopsy, PDAC pancreatic ductal adenocarcinoma, seq sequence, WGS whole-genome sequence, MB molecular barcodes, WES whole exome sequence