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. Author manuscript; available in PMC: 2024 Oct 19.
Published in final edited form as: Mol Cell. 2023 Oct 4;83(20):3679–3691.e8. doi: 10.1016/j.molcel.2023.09.015

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Anti-VSV-G epitope antibody Sigma Cat# V4888
Anti-H3 antibody Cell Signaling Technology Cat# 4499
Anti-H2B antibody Cell Signaling Technology Cat# 2934
Anti-FLAG M2-HRP Sigma Cat# A8592
Anti-RAD51 Cell Signaling Technology Cat# 18875
Anti-RPA34 Sigma Cat# MABE285
Anti-His-HRP Sigma Cat# A7058
Anti-GAPDH Cell Signaling Technology Cat# 2118S
Anti-β-Tubulin Cell Signaling Technology Cat# 2128S
Anti-HA Cell Signaling Technology Cat# 3724S
Anti-BRCA1 Santa Cruz Biotech Cat# SC6954
Anti-BARD1 Abcam Cat# ab50984
Anti-Lamin B1 Santa Cruz Biotech Cat# SC374015
Anti-53BP1 Sigma Cat# MAB3802
Anti-Actin Abcam Cat# ab3280
Anti-γH2AX Sigma Cat# 05636
Anti-©H2AX Cell Signaling Technology at# 9718S
Anti-CtIP Active Motif Cat# 61141; RRID: AB_2714164
Anti-BrdU BD Biosciences Cat# 347580; RRID: AB_400326
Anti-CtIP Invitrogen Cat# PA5–84133; RRID: AB_2791285
Chemicals, peptides, and recombinant proteins
Olaparib Selleckchem Cat#HY-10162; CAS: 763113–22-0
Camptothecin Sigma Cat#208925; CAS: 7689–03-4
Cisplatin Selleckchem Cat#P4394; CAS: 15663–27-1
Mitomycin C Sigma Cat#HY-13316; CAS: 50–07-7
Doxycycline Sigma Cat# D3447
BRCA1-BARD1 (WT or mutants) In this study N/A
BRCA1 fragments (BRCA1200–500, BRCA1500–894, and BRCA1936–1316) In this study N/A
BARD1 fragments (BARD1124–270, BARD1216–425, and BARD1425–565 In this study N/A
15N-labeled UBE2D3 In this study N/A
15N-labeled BRCA11–112-BARD26–142 In this study N/A
E1 (UBA1) In this study N/A
E2s (UBE2D3, UBE2W, UBE2E3, UBE2E2, UBE2E1, UBE2N, UBE2V2, UBE2B) In this study N/A
Ubiquitin In this study N/A
RING1B1–159/BMI11–109 In this study N/A
Histone octamer In this study N/A
phosphorylated CtIP In this study N/A
RAD51 In this study N/A
AlexaFluor488-Ubiquitin In this study N/A
AlexaFluor594-UBE2D3 In this study N/A
Critical commercial assays
Duolink PLA kit Sigma Cat# DUO92101
Q5 Site-Directed Mutagenesis Kit New England BioLabs Cat# E0554
Mammalian β-Galactosidase Kit Thermo Fisher Scientific Cat# T1029
Deposited data
Original images and blots This manuscript Mendeley data: doi:10.17632/9s37k6s8jr.1
Experimental models: Cell lines
HeLa ATCC CCL-2
U2OS (DR, SA, EJ5) Jeremy Stark Lab N/A
MDA-MB-436 Bing Xia Lab N/A
Oligonucleotides
Control siRNA (UAGCCGGUAGACUUAGGUCUG), Qiagen N/A
BRCA1 siRNA (AAGCUCCUCUCACUCUUCAGU) Qiagen N/A
TP53BP1 siRNA Thermo Fisher Scientific Cat# s14313
Recombinant DNA
pFB-BRCA1 In this study N/A
pFB-BRCA1 I26A In this study N/A
pFB-BRCA1 E3d In this study N/A
pFB-BRCA1 R71G In this study N/A
pFB-BARD1 In this study N/A
pFB-BARD1-P89A/W91A In this study N/A
pcDNA5/FRT-BRCA1 In this study N/A
pcDNA5/FRT-BRCA1 I26A In this study N/A
pcDNA5/FRT-BRCA1 E3d In this study N/A
pcDNA5/FRT-BRCA1 C61G In this study N/A
pcDNA5/FRT-BARD1 In this study N/A
pcDNA5/FRT-BARD1 P89A/W91A In this study N/A
pTRIP-Puro-P2A-BRCA1 In this study N/A
pTRIP-Puro-P2A-BRCA1 I26A In this study N/A
pTRIP-Puro-P2A-BRCA1 E3d In this study N/A
pTRIP-Blasticidin-P2A-BARD1 In this study N/A
Software and algorithms
GraphPad Prism 9 Graphpad https://www.graphpad.com/
Image J National Institutes of Health https://imagej.nih.gov/ij/
Image lab Bio-Rad https://www.bio-rad.com
Celleste 5 image analysis Invitrogen https://www.thermofisher.com/
Casplab software Casplab https://www.casplab.com/
Matlab MathWorks https://www.mathworks.com/
FlowJo software FlowJo https://www.Flowjo.com
Adobe Illustrator 2020 Adobe https://www.adobe.com
Adobe Photoshop 2023 Adobe https://www.adobe.com