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. Author manuscript; available in PMC: 2024 Oct 9.
Published in final edited form as: Curr Biol. 2023 Sep 12;33(19):4124–4135.e5. doi: 10.1016/j.cub.2023.08.042
location test n criterion notes
latency to laser stim (optotagging) Results, Figure 1 Wilcoxon rank sum number of ISIs; varies with cell p < 0.01 This test was performed for each cell recorded in PV-Cre rats and was one of 4 criteria used to determine opto-tagging
value coding assessment Results, Figures 23, S2S3 multiple linear regression, MATLAB function fitlm() number of behavioral trials; varies with recording session p < 0.05 This test was performed for all cells at each time in the behavioral tasks
significant response to cues Figure 4 E-test for comparing means under Poisson statistics62. spike counts in response bins p < 0.01 after Holm-Bonferroni correction for multiple comparisons (6 bins) This test was performed for all GPe Slow Pacemaker and VTA DA cells
comparison of peak response to task cues, GPe Slow Pacemaker - VTA DA Results, Figure 4 Wilcoxon rank sum number of cells; GPe SP Pavlovian, 82; VTA DA Pavlovian, 10, GPe SP instrumental, 93; VTA DA instrumental, 29 p < 0.05 Summary statistics shown in Figure 4A are median and interquartile intervals
RPE coding at peak firing rate Results, Figures 4, S4 linear regression, MATLAB function fitlm() number of behavioral trials; varies with recording session p < 0.01 This test was performed for all GPe Slow Pacemaker and VTA DA cells
Response latency to task cues Results, Figure 4 Wilcoxon rank sum number of cells; GPe SP Pavlovian, 82; VTA DA Pavlovian, 29, GPe SP instrumental, 93; VTA DA instrumenal, 29 p < 0.05 Summary statistics reported in Results are mean ± standard deviation
Duration of value coding, Pavlovian: ANOVA Results, Figure 5 Kruskal-Wallis number of cells by type: Fast Proto, 289; Slow Proto, 340; Arky, 231; Slow Pace, 82 p < 0.05 Summary statistics reported in Results are means
Duration of value coding, Pavlovian: pairwise comparisons Results, Figure 5 Wilcoxon rank sum see above p < 0.05
Duration of value coding, instrumental: ANOVA Results, Figure 5 Kruskal-Wallis number of cells by type: Fast Proto, 338; Slow Proto, 438; Arky, 292; Slow Pace, 93 p < 0.05 Summary statistics reported in Results are means
Duration of value coding, instrumental: pairwise comparisons Results, Figure 5 Wilcoxon rank sum see above p < 0.05
Consistency of value coding Results Pearson linear correlation number of cells by type: Fast Proto, 289; Slow Proto, 340; Arky, 231; Slow Pace, 82 p < 0.0125 (Bonferroni-corrected) Summary statistics reported in Results are correlation coefficients
value coding location, Pavlovian: ANOVA Results, Figure 6 Kruskal-Wallis number of cells by type: Fast Proto, 250; Slow Proto, 216; Arky, 168; Slow Pace, 50 p < 0.05 Summary statistics plotted in Figure 6C are means
value coding location, instrumental: ANOVA Results, Figure 6 Kruskal-Wallis number of cells by type: Fast Proto, 265; Slow Proto, 229; Arky, 177; Slow Pace, 51 p < 0.05 Summary statistics plotted in Figure 6C are means