Table 2.
Summary of parametric survival generalized gamma models for elementary, partially enriched and fully enriched models, including coefficients and model fit statistics. The unit of analysis were models with model fit and calibration described at the bottom.
Partially enriched models | ||||||
---|---|---|---|---|---|---|
Parameter | Elementary (eGFR, UPCR, diagnosis only) | PE Model 1 (Elementary + BP + ΔGFR) | PE Model 2 (Elementary + BP + Anemia) | PE Model 3 (Elementary + BP + lab values) | PE Model 4 (Elementary + BP + Anemia + lab values) | Enriched (All predictors) |
β | ||||||
Intercept | 2.8624 | 2.8993 | 2.9967 | 3.7450 | 4.4095 | 4.4493 |
Per 1 log increase in (eGFR/45) | 2.0868 | 1.9511 | 1.9769 | 2.1789 | 2.0944 | 1.9837 |
Per 1 log increase in (eGFR/45)×(eGFR ≥ 45) | −1.0758 | −1.0091 | −1.1370 | −1.3874 | −1.4511 | −1.4158 |
Glomerular non-HUS vs. Non-glom/HUS | −0.1532 | −0.0718 | −0.0511 | −0.1071 | −0.0231 | 0.0268 |
Per 1 log increase in (eGFR/45) × Glom non-HUS | 1.0386 | 0.8132 | 0.9807 | 0.6812 | 0.7360 | 0.6275 |
Per 1 log increase in (eGFR/45)×(eGFR ≥ 45) × Glom non-HUS | −1.2154 | −1.0010 | −1.0714 | −0.5795 | −0.6282 | −0.5253 |
Per 1 log increase in (UPCR/0.5) | −0.1959 | −0.2123 | −0.2127 | −0.1720 | −0.1984 | −0.1968 |
Per 1 log increase in (UPCR/0.5) × (UPCR ≥ 0.5) | −0.3146 | −0.2721 | −0.2566 | −0.2102 | −0.1803 | −0.1759 |
Elevated BP/hypertension vs. normal BP | −0.2229 | −0.2337 | −0.2242 | −0.2339 | −0.2282 | |
Per 1 increase in Δ( log(eGFR)) per year | 0.4349 | 0.3934 | ||||
Anemia vs. no anemiaa | −0.3617 | −0.3162 | −0.3033 | |||
Per 1 unit increase in albumin, mg/dLb | 0.3802 | 0.3168 | 0.3172 | |||
Per 1 unit increase in chloride, mmol/Lb | −0.0235 | −0.0248 | −0.0255 | |||
Per 1 unit increase in CO2, mmol/Lb | 0.0005 | −0.0074 | −0.0071 | |||
σ | ||||||
Intercept | 0.7440 | 0.7454 | 0.7441 | 0.7204 | 0.7242 | 0.7262 |
Glomerular non-HUS vs. Non-glom/HUS | 0.2627 | 0.1744 | 0.2521 | 0.2426 | 0.2172 | 0.1390 |
K | ||||||
Intercept | 0.4253 | 0.3888 | 0.3513 | 0.4467 | 0.4163 | 0.3914 |
Glomerular non-HUS vs. Non-glom/HUS | −0.0005 | 0.2204 | 0.1023 | 0.0768 | 0.1367 | 0.2787 |
Model fit and calibration | ||||||
AIC | 1476.48 | 1470.09 | 1457.68 | 1456.72 | 1446.15 | 1445.06 |
Likelihood ratio test | ||||||
Compared to elementary | Ref | 0.006 | <0.001 | <0.001 | <0.001 | <0.001 |
Compared to enriched | <0.001 | <0.001 | <0.001 | <0.001 | 0.080 | Ref |
Optimism-corrected c-statistic | 0.865 | 0.866 | 0.874 | 0.871 | 0.875 | 0.875 |
Greenwood-Nam-D’Agostino test statistic | ||||||
At 2 years with 4 bins () | 2.201 | 2.213 | 2.237 | 2.318 | 1.526 | 1.903 |
p-value | 0.53 | 0.53 | 0.52 | 0.51 | 0.68 | 0.59 |
At 5 years with 6 bins () | 4.123 | 5.022 | 4.827 | 4.231 | 3.518 | 2.643 |
p-value | 0.53 | 0.41 | 0.44 | 0.52 | 0.62 | 0.75 |
Anemia defined as current low hemoglobin.
Laboratory-measured serum biomarkers from renal panel.