Table 2:
Distribution of predicted pheromone genes across phylogenetic groups
Phylogenetic group | Genus* | Family* | Clade name | Major Clade | Species count | Distinct pheromone candidates** (species avg) | Pheromone copy number*** (species avg) |
---|---|---|---|---|---|---|---|
| |||||||
phylogroup 1 | Debaryomycetaceae/Metschnikowiaceae | Debaryomycetaceae/Metschinikowiaceae | CUG-Ser1 | 70 | 1.4 | 5.3 | |
phylogroup 6 | Komagataella | Saccharomycetales incertae sedis | Pichiaceae | 3 | 1.0 | 2.0 | |
phylogroup 7 | Citeromyces | Saccharomycetales incertae sedis | Pichiaceae | 3 | 1.0 | 12.7 | |
phylogroup 10 | Pichiaceae/Saccharomycetales incertae sedis | Pichiaceae | Pichiaceae | 41 | 1.7 | 2.3 | |
phylogroup 12 | Ascoidea | Ascoideaceae | CUG-Ser2 | 1 | 1.0 | 3.0 | |
phylogroup 13 | Hanseniaspora | Saccharomycodaceae | Saccharomycodaceae | Saccharomycodaceae | 8 | 1.0 | 2.0 |
phylogroup 14 | Saccharomycetaceae | Saccharomycetaceae | Saccharomycetaceae | 71 | 1.1 | 1.7 | |
phylogroup 16 | Starmera | Phaffomycetaceae | Phaffomycetaceae | 3 | 1.0 | 1.3 | |
phylogroup 17 | Phaffomycetaceae | Phaffomycetaceae | Phaffomycetaceae | 30 | 1.6 | 3.4 | |
phylogroup 18 | Sporopachydermia | Saccharomycetales incertae sedis | Sporopachydermia clade | 2 | 1.0 | 2.5 | |
phylogroup 22 | Yarrowia | Dipodascaceae | Yarrowia | Dipodascaceae/Trichomonascaceae | 5 | 1.0 | 8.6 |
phylogroup 24 | Dipodascus | Dipodascaceae | Dipodascaceae/Trichomonascaceae | 2 | 1.0 | 1.0 | |
phylogroup 30 | Starmerella | Dipodascaceae | Dipodascaceae/Trichomonascaceae | 2 | 1.0 | 2.5 |
Genus is listed if there is only 1 genus represented in the phylogenetic group. Most phylogroups contain species of a single family, and often of a single genus. Left blank when species across multiple genus are present in the phylogroup.
Distinct pheromones are determined in every species and averaged across species in the phylogenetic group.
Copynumber of each distinct pheromone is averaged within a species (for species that have more than one distinct candidate), and then averaged across species in a phylogenetic group.
See also Table S2.