Table 1:
# colvars, harmonic force constants (FC), kcal/mol/Å2 | Replicates × length,μs | RMSD validation restraints | ||
---|---|---|---|---|
Lipid-protein PREs+NOEs,b FC | NOEs in protein,c FC | (divergent trajectories) | ||
Asp−1 830 | 55, 0.02 | 116, 0.05 | 5 × 0.3 | 1.9 ± 1.1 |
Asp−1 830, half of depth restraints | 28, 0.02 | 116, 0.05 | 5 × 0.2 | 5.0 ± 5.5 (2) |
Asp−1 830, no depth restraints | 0, 0 | 116, 0.01 | 5 × 0.2 | 3.1 ± 2.5 |
Asp0 830 | 55, 0.02 | 116, 0.05 | 5 × 0.3 | 2.2 ± 1.0 |
Asp0 830, half of depth restraints | 28, 0.02 | 116, 0.01 | 5 × 0.2 | 2.4 ± 1.1 |
Asp0 830, no depth restraints | 0, 0 | 116, 0.01 | 5 × 0.2 | 3.5 ± 3.0 (1) |
Asp0 820/830/839/843 | 55, 0.02 | 116, 0.05 | 5 × 0.3 | 2.4 ± 0.8 |
Asp0 820/830/839/843 | 28, 0.02 | 116, 0.01 | 5 × 0.2 | 7.8 ± 10.3 (1) |
Asp0 820/830/839/843, no depth restraints | 0, 0 | 116, 0.01 | 5 × 0.2 | 3.3 ± 2.3 |