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. 2023 Oct 4;18(10):2324–2334. doi: 10.1021/acschembio.3c00452

Table 1. Rate Constants kobs of B. subtilisglmS Ribozyme Cleavage Induced by Compounds (R)-2, (S)-2, (R)-3, (S)-3, Methylene Phosphonate C, Thia-GlcN6P 4, and GlcN6P.

    kobs [min–1]
compound pKa2 @ 10 μM @ 200 μM @ 500 μM @ 1 mM
GlcN6P 6.2 ± 0.1 0.820 ± 0.04 2.21 ± 0.18 2.49 ± 0.28 n.d.
C 7.5 ± 0.1 n.d. 0.103 ± 0.004 0.332 ± 0.01 0.439 ± 0.05
(R)-2 7.2 ± 0.1 n.d. 0.069 ± 0.004 0.211 ± 0.01 0.270 ± 0.01
(S)-2   n.d. 0.078 ± 0.004 0.157 ± 0.01 0.362 ± 0.03
(R)-3   n.d. 0.049 ± 0.002 0.174 ± 0.01 0.173 ± 0.01
(S)-3 6.3 ± 0.1 n.d. n.d. 0.091 ± 0.004 0.055 ± 0.003
4   1.09 ± 0.15 2.44 ± 0.12 2.36 ± 0.04 n.d.