Table 1.
Gene composition in the mitogenome of P. granatum
| Group of Genes | Gene name | Length | Start codon | Stop codon | Amino acid |
|---|---|---|---|---|---|
| ATP synthase | atp1 | 1536 | ATG | TAA | 512 |
| atp4 | 597 | ATG | TAG | 199 | |
| atp6 | 747 | ATG | TGA | 249 | |
| atp8 | 480 | ATG | TAA | 160 | |
| atp9(2) | 225 | ATG | CGA(TGA) | 75 | |
| Cytohrome c biogenesis | ccmB | 621 | ATG | TGA | 207 |
| ccmC | 753 | ATG | TGA | 251 | |
| ccmFc | 1356 | ATG | TAA | 452 | |
| ccmFn* | 1737 | ATG | TAA | 579 | |
| Ubichinol cytochrome c reductase | cob | 1890 | ATG | TAA | 630 |
| Cytochrome c oxidase | cox1 | 1065 | ATG | TAA | 355 |
| cox2* | 783 | ATG | TAA | 261 | |
| cox3 | 798 | ATG | TGA | 266 | |
| Maturases | matR | 1926 | ATG | TAA | 642 |
| Transport membrance protein | mttB(2) | 342 | ATG | TGA | 114 |
| NADH dehydrogenase | nad1**** | 978 | ACG(ATG) | TAA | 326 |
| nad2(2)**** | 1467 | ATG | TAA | 489 | |
| nad3 | 357 | ATG | TAA | 119 | |
| nad4*** | 1488 | ATG | TGA | 496 | |
| nad4L | 303 | ATG | TAA | 101 | |
| nad5(2)**** | 2013 | ATG | TAA | 671 | |
| nad6 | 618 | ATG | TAA | 206 | |
| nad7**** | 1185 | ATG | TAG | 395 | |
| nad9 | 573 | ATG | TAA | 191 | |
| Ribosomal proteins (LSU) | rpl10 | 489 | ATG | TAA | 163 |
| rpl16 | 249 | ATG | TAA | 83 | |
| rpl2 | 1014 | ATG | TAA | 338 | |
| rpl5 | 564 | ATG | TAA | 188 | |
| Ribosomal proteins (SSU) | rps1 | 624 | ATG | TAA | 208 |
| rps12* | 378 | ATG | TGA | 126 | |
| rps14 | 303 | ATG | TAG | 101 | |
| rps19 | 285 | ATG | TAA | 95 | |
| rps3 | 1710 | ATG | TAA | 570 | |
| rps4 | 1047 | ATG | TAA | 349 | |
| rps7 | 447 | ATG | TAA | 149 | |
| Succinate dehydrogenase | sdh4 | 387 | ATG | CGA(TGA) | 129 |
| Ribosomal RNAs | rrn18 | 1929 | |||
| rrn26 | 3403 | ||||
| rrn5 | 121 | ||||
| Transfer RNAs | trnA-TGC* | 65 | |||
| trnC-GCA(2) | 71/73 | ||||
| trnD-GTC | 74 | ||||
| trnE-TTC | 72 | ||||
| trnF-GAA | 74 | ||||
| trnG-GCC | 72 | ||||
| trnH-GTG | 74 | ||||
| trnI-GAT* | 72 | ||||
| trnI-TAT* | 76 | ||||
| trnK-TTT | 73 | ||||
| trnM-CAT(3) | 74/73/74 | ||||
| trnN-GTT | 72 | ||||
| trnP-TGG(3) | 74/75/75 | ||||
| trnQ-TTG | 72 | ||||
| trnS-GCT | 88 | ||||
| trnS-TGA(2) | 93/87 | ||||
| trnV-GAC | 72 | ||||
| trnW-CCA | 74 | ||||
| trnY-GTA | 83 |
Note: Numbers after gene names are the number of copies. The superscripts * represent the number of contained introns